Species:

1. Avian infectious bronchitis virus (strain beaudette) [TaxId:11120] [196077] (2 PDB entries)

   1. Domain for 3ejf:

      • Domain d3ejfa_: 3ejf A: [196078] automated match to d2vria_

   2. Domain for 3eke:

      • Domain d3ekea_: 3eke A: [209543] automated match to d3ejfa_ complexed with tla

2. Avian infectious bronchitis virus [TaxId:11120] [232123] (2 PDB entries)

   1. Domains for 3ewo:

      1. Domain d3ewoa1: 3ewo A:1-174 [232124] Other proteins in same PDB: d3ewoa2 automated match to d3ekea_

      2. Domain d3ewob_: 3ewo B: [232125] Other proteins in same PDB: d3ewoa2 automated match to d3ekea_

   2. Domains for 3ewp:

      1. Domain d3ewpa1: 3ewp A:1-174 [245925] Other proteins in same PDB: d3ewpa2 automated match to d3ewoa_ protein/RNA complex; complexed with apr

      2. Domain d3ewpb_: 3ewp B: [245926] Other proteins in same PDB: d3ewpa2 automated match to d3ewoa_ protein/RNA complex; complexed with apr

3. Cow (Bos taurus) [TaxId:9913] [255154] (2 PDB entries)
   1. Domain for 2ewb:

      • Domain d2ewba2: 2ewb A:1-159 [132453] Other proteins in same PDB: d2ewba1 automated match to d1lama2 complexed with co3, mpd, na, zed, zn

   2. Domain for 2j9a:

      • Domain d2j9aa2: 2j9a A:1-159 [138150] Other proteins in same PDB: d2j9aa1 automated match to d1lama2 complexed with ahy, cl, dms, mpd, zn

4. Human (Homo sapiens) [TaxId:9606] [256134] (4 PDB entries)

   1. Domain for 3q71:

      • Domain d3q71a1: 3q71 A:999-1191 [344987] Other proteins in same PDB: d3q71a2 automated match to d5o2da_ complexed with ar6

   2. Domains for 3vfq:

      1. Domain d3vfqa1: 3vfq A:791-974 [250540] automated match to d2dx6a_ complexed with ar6

      2. Domain d3vfqa2: 3vfq A:1015-1191 [250541] automated match to d2dx6a_ complexed with ar6

   3. Domains for 4d86:

      1. Domain d4d86a1: 4d86 A:791-974 [251379] automated match to d2dx6a_ complexed with adp

      2. Domain d4d86a2: 4d86 A:1015-1191 [251380] automated match to d2dx6a_ complexed with adp

   4. Domain for 5o2d:

      • Domain d5o2da_: 5o2d A: [341272] automated match to d5cb5d_ complexed with 9hh

5. Human coronavirus 229E [TaxId:11137] [225531] (3 PDB entries)

   1. Domain for 3ejg:

      • Domain d3ejga_: 3ejg A: [209516] automated match to d2vria_

   2. Domain for 3ewq:

      • Domain d3ewqa_: 3ewq A: [232126] automated match to d3ejga_

   3. Domain for 3ewr:

      • Domain d3ewra_: 3ewr A: [245927] automated match to d3ewqa_ protein/RNA complex; complexed with apr

6. Human coronavirus nl63 [TaxId:277944] [188918] (1 PDB entry)

   • Domain for 2vri:

     • Domain d2vria_: 2vri A: [168772] automated match to d2acfa1 complexed with edo

7. Middle east respiratory syndrome coronavirus [TaxId:1335626] [280335] (3 PDB entries)

   1. Domain for 5dus:

      • Domain d5dusa1: 5dus A:1-164 [280336] Other proteins in same PDB: d5dusa2 automated match to d2acfd_ complexed with apr, gol, so4

   2. Domain for 5hih:

      • Domain d5hiha1: 5hih A:1-166 [315147] Other proteins in same PDB: d5hiha2 automated match to d2fava_

   3. Domain for 5hol:

      • Domain d5hola1: 5hol A:1-166 [314761] Other proteins in same PDB: d5hola2 automated match to d2fava_ complexed with apr

8. Middle east respiratory syndrome-related coronavirus [TaxId:1335626] [371715] (4 PDB entries)

   1. Domain for 5zu7:

      • Domain d5zu7a1: 5zu7 A:1-164 [371733] Other proteins in same PDB: d5zu7a2 automated match to d2fava_ complexed with amp

   2. Domain for 5zu9:

      • Domain d5zu9a1: 5zu9 A:1-164 [371716] Other proteins in same PDB: d5zu9a2 automated match to d2fava_ complexed with adp

   3. Domain for 5zua:

      • Domain d5zuaa1: 5zua A:1-164 [371780] Other proteins in same PDB: d5zuaa2 automated match to d2fava_ complexed with atp

   4. Domain for 5zub:

      • Domain d5zuba1: 5zub A:1-164 [371751] Other proteins in same PDB: d5zuba2 automated match to d2fava_ complexed with nad

9. Norway rat (Rattus norvegicus) [TaxId:10116] [186871] (1 PDB entry)

   • Domains for 1yd9:

     1. Domain d1yd9b_: 1yd9 B: [122977] Other proteins in same PDB: d1yd9a1, d1yd9c3 automated match to d1spva_ complexed with au

     2. Domain d1yd9c2: 1yd9 C:6-191 [122978] Other proteins in same PDB: d1yd9a1, d1yd9c3 automated match to d1spva_ complexed with au

     3. Domain d1yd9d_: 1yd9 D: [122979] Other proteins in same PDB: d1yd9a1, d1yd9c3 automated match to d1spva_ complexed with au

10. Oceanobacillus iheyensis [TaxId:221109] [333701] (6 PDB entries)

    1. Domains for 5fud:

       1. Domain d5fuda1: 5fud A:1-185 [333702] Other proteins in same PDB: d5fuda2, d5fudb2 automated match to d5cb5d_ complexed with cl, mes, so4

       2. Domain d5fudb1: 5fud B:1-185 [333728] Other proteins in same PDB: d5fuda2, d5fudb2 automated match to d5cb5d_ complexed with cl, mes, so4

    2. Domains for 5l9k:

       1. Domain d5l9ka1: 5l9k A:1-185 [333793] Other proteins in same PDB: d5l9ka2, d5l9kb2 automated match to d5cb5d_ complexed with ar6, gol

       2. Domain d5l9kb1: 5l9k B:1-185 [333757] Other proteins in same PDB: d5l9ka2, d5l9kb2 automated match to d5cb5d_ complexed with ar6, gol

    3. Domains for 5l9q:

       1. Domain d5l9qa1: 5l9q A:1-185 [333759] Other proteins in same PDB: d5l9qa2, d5l9qb2 automated match to d5cb5d_ complexed with adp, so4

       2. Domain d5l9qb1: 5l9q B:1-185 [333781] Other proteins in same PDB: d5l9qa2, d5l9qb2 automated match to d5cb5d_ complexed with adp, so4

    4. Domain for 5lau:

       • Domain d5laua1: 5lau A:1-184 [333763] Other proteins in same PDB: d5laua2 automated match to d5cb3a_ complexed with ar6, gol; mutant

    5. Domain for 5lbp:

       • Domain d5lbpa1: 5lbp A:1-185 [333808] Other proteins in same PDB: d5lbpa2 automated match to d1vhua_ complexed with po4; mutant

    6. Domains for 5lcc:

       1. Domain d5lcca1: 5lcc A:1-185 [333755] Other proteins in same PDB: d5lcca2, d5lccb2 automated match to d5cb5d_ mutant

       2. Domain d5lccb1: 5lcc B:1-185 [333749] Other proteins in same PDB: d5lcca2, d5lccb2 automated match to d5cb5d_ mutant

11. Streptomyces coelicolor [TaxId:100226] [323276] (1 PDB entry)

    • Domain for 5e3b:

      • Domain d5e3ba_: 5e3b A: [323277] automated match to d2afca1 complexed with edo, na

12. Thermus thermophilus HB8 [TaxId:300852] [187646] (1 PDB entry)

    • Domains for 2dx6:

      1. Domain d2dx6a_: 2dx6 A: [163733] automated match to d1spva_ complexed with act, ipa

      2. Domain d2dx6b_: 2dx6 B: [163734] automated match to d1spva_ complexed with act, ipa

More info for Protein automated matches from c.50.1.0: automated matches

Timeline for Protein automated matches from c.50.1.0: automated matches:

• Protein automated matches from c.50.1.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from c.50.1.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from c.50.1.0: automated matches appears in the current release, SCOPe 2.08