SCOPe 2.08: Protein: Hyaluronidase catalytic domain

Lineage for Protein: Hyaluronidase catalytic domain

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

Family c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4 proteins)
Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain

Protein Hyaluronidase catalytic domain [141792] (1 species)

Species:

Clostridium perfringens [TaxId:1502] [141793] (9 PDB entries)
Uniprot Q8XL08 179-495

Domains for 2cbi:
1. Domain d2cbia2: 2cbi A:179-495 [130180]
  Other proteins in same PDB: d2cbia1, d2cbia3, d2cbib1, d2cbib3
  complexed with cl, gbl, gol, so4, zn
2. Domain d2cbib2: 2cbi B:179-495 [130183]
  Other proteins in same PDB: d2cbia1, d2cbia3, d2cbib1, d2cbib3
  automated match to d2cbia2
  complexed with cl, gbl, gol, so4, zn
Domains for 2cbj:
1. Domain d2cbja2: 2cbj A:179-495 [130186]
  Other proteins in same PDB: d2cbja1, d2cbja3, d2cbjb1, d2cbjb3
  automated match to d2cbia2
  complexed with cl, oan
2. Domain d2cbjb2: 2cbj B:179-495 [130189]
  Other proteins in same PDB: d2cbja1, d2cbja3, d2cbjb1, d2cbjb3
  automated match to d2cbia2
  complexed with cl, oan
Domains for 2j62:
1. Domain d2j62a2: 2j62 A:179-495 [147890]
  Other proteins in same PDB: d2j62a1, d2j62a3, d2j62b1, d2j62b3
  complexed with cl, gsz
2. Domain d2j62b2: 2j62 B:179-495 [147893]
  Other proteins in same PDB: d2j62a1, d2j62a3, d2j62b1, d2j62b3
  automatically matched to 2J62 A:179-495
  complexed with cl, gsz
Domains for 2v5c:
1. Domain d2v5ca2: 2v5c A:179-495 [206230]
  Other proteins in same PDB: d2v5ca1, d2v5ca3, d2v5cb1, d2v5cb3
  automated match to d2cbia2
  complexed with ca, cac, na
2. Domain d2v5cb2: 2v5c B:179-495 [206233]
  Other proteins in same PDB: d2v5ca1, d2v5ca3, d2v5cb1, d2v5cb3
  automated match to d2cbia2
  complexed with ca, cac, na
Domains for 2vur:
1. Domain d2vura2: 2vur A:179-495 [206489]
  Other proteins in same PDB: d2vura1, d2vura3, d2vurb1, d2vurb3
  automated match to d2cbia2
  complexed with so4, yx1
2. Domain d2vurb2: 2vur B:179-495 [206492]
  Other proteins in same PDB: d2vura1, d2vura3, d2vurb1, d2vurb3
  automated match to d2cbia2
  complexed with so4, yx1
Domains for 2wb5:
1. Domain d2wb5a2: 2wb5 A:179-495 [206750]
  Other proteins in same PDB: d2wb5a1, d2wb5a3, d2wb5b1, d2wb5b3
  automated match to d2j62a2
  complexed with cl, na, vgb
2. Domain d2wb5b2: 2wb5 B:179-495 [206753]
  Other proteins in same PDB: d2wb5a1, d2wb5a3, d2wb5b1, d2wb5b3
  automated match to d2j62a2
  complexed with cl, na, vgb
Domains for 2x0y:
1. Domain d2x0ya2: 2x0y A:179-495 [207092]
  Other proteins in same PDB: d2x0ya1, d2x0ya3, d2x0yb1, d2x0yb3
  automated match to d2cbia2
  complexed with x0t
2. Domain d2x0yb2: 2x0y B:179-495 [207095]
  Other proteins in same PDB: d2x0ya1, d2x0ya3, d2x0yb1, d2x0yb3
  automated match to d2cbia2
  complexed with x0t
Domain for 5oxd:
- Domain d5oxda2: 5oxd A:179-495 [352187]
  Other proteins in same PDB: d5oxda1, d5oxda3
  automated match to d2v5ca2
  complexed with b2w, cd

Domains for 7khv:

Domain d7khva2: 7khv A:179-495 [394971]
Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
automated match to d2v5ca2
complexed with ca, cl, so4, x1a

Domain d7khvb2: 7khv B:179-495 [395002]
Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
automated match to d2v5ca2
complexed with ca, cl, so4, x1a

Domain d7khvc2: 7khv C:179-495 [395008]
Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
automated match to d2v5ca2
complexed with ca, cl, so4, x1a

Domain d7khvd2: 7khv D:179-495 [395059]
Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
automated match to d2v5ca2
complexed with ca, cl, so4, x1a

Domain d7khve2: 7khv E:179-495 [395195]
Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
automated match to d2v5ca2
complexed with ca, cl, so4, x1a

Domain d7khvf1: 7khv F:179-495 [395041]
Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
automated match to d2v5ca2
complexed with ca, cl, so4, x1a

More info for Protein Hyaluronidase catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain

Timeline for Protein Hyaluronidase catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain:

Protein Hyaluronidase catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain first appeared in SCOP 1.73
Protein Hyaluronidase catalytic domain from c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain appears in SCOPe 2.07