Lineage for Species: Clostridium perfringens [TaxId: 1502]

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. Family c.1.8.10: alpha-D-glucuronidase/Hyaluronidase catalytic domain [82253] (4 proteins)
    Glycosyl hydrolase family 67, GH67; structurally related to GH20; contains extra C-terminal alpha-helical subdomain
  6. Protein Hyaluronidase catalytic domain [141792] (1 species)
  7. Species Clostridium perfringens [TaxId:1502] [141793] (9 PDB entries)
    Uniprot Q8XL08 179-495

PDB entries in Species: Clostridium perfringens [TaxId: 1502]:

  1. Domain(s) for 2cbi:
    1. Domain d2cbia2: 2cbi A:179-495 [130180]
      Other proteins in same PDB: d2cbia1, d2cbia3, d2cbib1, d2cbib3
      complexed with cl, gbl, gol, so4, zn
    2. Domain d2cbib2: 2cbi B:179-495 [130183]
      Other proteins in same PDB: d2cbia1, d2cbia3, d2cbib1, d2cbib3
      automated match to d2cbia2
      complexed with cl, gbl, gol, so4, zn
  2. Domain(s) for 2cbj:
    1. Domain d2cbja2: 2cbj A:179-495 [130186]
      Other proteins in same PDB: d2cbja1, d2cbja3, d2cbjb1, d2cbjb3
      automated match to d2cbia2
      complexed with cl, oan
    2. Domain d2cbjb2: 2cbj B:179-495 [130189]
      Other proteins in same PDB: d2cbja1, d2cbja3, d2cbjb1, d2cbjb3
      automated match to d2cbia2
      complexed with cl, oan
  3. Domain(s) for 2j62:
    1. Domain d2j62a2: 2j62 A:179-495 [147890]
      Other proteins in same PDB: d2j62a1, d2j62a3, d2j62b1, d2j62b3
      complexed with cl, gsz
    2. Domain d2j62b2: 2j62 B:179-495 [147893]
      Other proteins in same PDB: d2j62a1, d2j62a3, d2j62b1, d2j62b3
      automatically matched to 2J62 A:179-495
      complexed with cl, gsz
  4. Domain(s) for 2v5c:
    1. Domain d2v5ca2: 2v5c A:179-495 [206230]
      Other proteins in same PDB: d2v5ca1, d2v5ca3, d2v5cb1, d2v5cb3
      automated match to d2cbia2
      complexed with ca, cac, na
    2. Domain d2v5cb2: 2v5c B:179-495 [206233]
      Other proteins in same PDB: d2v5ca1, d2v5ca3, d2v5cb1, d2v5cb3
      automated match to d2cbia2
      complexed with ca, cac, na
  5. Domain(s) for 2vur:
    1. Domain d2vura2: 2vur A:179-495 [206489]
      Other proteins in same PDB: d2vura1, d2vura3, d2vurb1, d2vurb3
      automated match to d2cbia2
      complexed with so4, yx1
    2. Domain d2vurb2: 2vur B:179-495 [206492]
      Other proteins in same PDB: d2vura1, d2vura3, d2vurb1, d2vurb3
      automated match to d2cbia2
      complexed with so4, yx1
  6. Domain(s) for 2wb5:
    1. Domain d2wb5a2: 2wb5 A:179-495 [206750]
      Other proteins in same PDB: d2wb5a1, d2wb5a3, d2wb5b1, d2wb5b3
      automated match to d2j62a2
      complexed with cl, na, vgb
    2. Domain d2wb5b2: 2wb5 B:179-495 [206753]
      Other proteins in same PDB: d2wb5a1, d2wb5a3, d2wb5b1, d2wb5b3
      automated match to d2j62a2
      complexed with cl, na, vgb
  7. Domain(s) for 2x0y:
    1. Domain d2x0ya2: 2x0y A:179-495 [207092]
      Other proteins in same PDB: d2x0ya1, d2x0ya3, d2x0yb1, d2x0yb3
      automated match to d2cbia2
      complexed with x0t
    2. Domain d2x0yb2: 2x0y B:179-495 [207095]
      Other proteins in same PDB: d2x0ya1, d2x0ya3, d2x0yb1, d2x0yb3
      automated match to d2cbia2
      complexed with x0t
  8. Domain(s) for 5oxd:
  9. Domain(s) for 7khv:
    1. Domain d7khva2: 7khv A:179-495 [394971]
      Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
      automated match to d2v5ca2
      complexed with ca, cl, so4, x1a
    2. Domain d7khvb2: 7khv B:179-495 [395002]
      Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
      automated match to d2v5ca2
      complexed with ca, cl, so4, x1a
    3. Domain d7khvc2: 7khv C:179-495 [395008]
      Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
      automated match to d2v5ca2
      complexed with ca, cl, so4, x1a
    4. Domain d7khvd2: 7khv D:179-495 [395059]
      Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
      automated match to d2v5ca2
      complexed with ca, cl, so4, x1a
    5. Domain d7khve2: 7khv E:179-495 [395195]
      Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
      automated match to d2v5ca2
      complexed with ca, cl, so4, x1a
    6. Domain d7khvf1: 7khv F:179-495 [395041]
      Other proteins in same PDB: d7khva1, d7khva3, d7khvb1, d7khvb3, d7khvc1, d7khvc3, d7khvd1, d7khvd3, d7khve1, d7khve3, d7khvf2
      automated match to d2v5ca2
      complexed with ca, cl, so4, x1a

More info for Species Clostridium perfringens [TaxId:1502] from c.1.8.10 Hyaluronidase catalytic domain

Timeline for Species Clostridium perfringens [TaxId:1502] from c.1.8.10 Hyaluronidase catalytic domain: