Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.116: alpha/beta knot [75216] (1 superfamily) core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot |
Superfamily c.116.1: alpha/beta knot [75217] (9 families) known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily all known members have dimeric structures |
Family c.116.1.0: automated matches [191557] (1 protein) not a true family |
Protein automated matches [190961] (13 species) not a true protein |
Anaplasma phagocytophilum [TaxId:212042] [232723] (2 PDB entries) |
Domain d3knua_: 3knu A: [232724] automated match to d3quva_ |
Domain d3knub_: 3knu B: [232725] automated match to d3quva_ |
Domain d3knuc_: 3knu C: [232726] automated match to d3quva_ |
Domain d3knud_: 3knu D: [232727] automated match to d3quva_ |
Domain d4ig6a_: 4ig6 A: [252618] automated match to d3knub_ protein/RNA complex; complexed with cl, sah |
Archaeoglobus fulgidus [TaxId:2234] [255990] (1 PDB entry) |
Domain d3o7ba_: 3o7b A: [248124] automated match to d3bbda1 complexed with sah, tyr |
Bacillus anthracis [TaxId:261594] [257590] (1 PDB entry) |
Domain d4pzka_: 4pzk A: [257591] automated match to d3l8ub_ complexed with sah |
Domain d4pzkb_: 4pzk B: [257592] automated match to d3l8ub_ complexed with sah |
Bartonella henselae [TaxId:38323] [225732] (1 PDB entry) |
Domain d3iefa_: 3ief A: [211603] automated match to d3ky7a_ |
Domain d3iefb_: 3ief B: [211604] automated match to d3ky7a_ |
Burkholderia phymatum [TaxId:391038] [256282] (2 PDB entries) |
Domain d4h3ya_: 4h3y A: [252374] automated match to d1uala_ complexed with cl, sah |
Domain d4h3yb_: 4h3y B: [252375] automated match to d1uala_ complexed with cl, sah |
Domain d4h3za_: 4h3z A: [252376] automated match to d1uala_ complexed with cl, sah |
Domain d4h3zb_: 4h3z B: [252377] automated match to d1uala_ complexed with cl, sah |
Burkholderia pseudomallei [TaxId:320372] [197042] (1 PDB entry) |
Domain d4kgna_: 4kgn A: [197043] automated match to d3e5ya_ complexed with cl, sah |
Domain d4kgnb_: 4kgn B: [197044] automated match to d3e5ya_ complexed with cl, sah |
Burkholderia pseudomallei [TaxId:425067] [188581] (2 PDB entries) |
Domain d3e5ya_: 3e5y A: [174682] automated match to d1j85a_ |
Domain d3e5yb_: 3e5y B: [174683] automated match to d1j85a_ |
Domain d4kgnc_: 4kgn C: [202845] automated match to d3e5ya_ complexed with cl, sah |
Domain d4kgnd_: 4kgn D: [202846] automated match to d3e5ya_ complexed with cl, sah |
Domain d4kgne_: 4kgn E: [202847] automated match to d3e5ya_ complexed with cl, sah |
Domain d4kgnf_: 4kgn F: [202848] automated match to d3e5ya_ complexed with cl, sah |
Domain d4kgng_: 4kgn G: [202849] automated match to d3e5ya_ complexed with cl, sah |
Domain d4kgnh_: 4kgn H: [202850] automated match to d3e5ya_ complexed with cl, sah |
Escherichia coli K-12 [TaxId:83333] [234948] (2 PDB entries) |
Domain d4jaka_: 4jak A: [234949] automated match to d4kgnd_ |
Domain d4jakb_: 4jak B: [234950] automated match to d4kgnd_ |
Domain d4jala_: 4jal A: [237816] automated match to d4jaka_ complexed with edo, epe, sah |
Domain d4jalb_: 4jal B: [237817] automated match to d4jaka_ complexed with edo, epe, sah |
Methanocaldococcus jannaschii [TaxId:2190] [189685] (2 PDB entries) |
Domain d3ai9x_: 3ai9 X: [172203] automated match to d2qmma1 complexed with mg, sam |
Domain d3aiaa_: 3aia A: [172204] automated match to d2qmma1 complexed with pbl, sam |
Domain d3aiab_: 3aia B: [172205] automated match to d2qmma1 complexed with pbl, sam |
Mycobacterium abscessus [TaxId:561007] [226092] (1 PDB entry) |
Domain d3quva_: 3quv A: [215428] automated match to d1oy5a_ complexed with edo |
Domain d3quvb_: 3quv B: [215429] automated match to d1oy5a_ complexed with edo |
Pyrococcus horikoshii [TaxId:53953] [255719] (1 PDB entry) |
Domain d2yy8a_: 2yy8 A: [244880] automated match to d2o3aa1 protein/RNA complex; complexed with mta, sam |
Domain d2yy8b_: 2yy8 B: [244881] automated match to d2o3aa1 protein/RNA complex; complexed with mta, sam |
Staphylococcus aureus [TaxId:282458] [189168] (1 PDB entry) |
Domain d3ky7a_: 3ky7 A: [179805] automated match to d1uaja_ |
Streptococcus mutans [TaxId:210007] [189590] (1 PDB entry) |
Domain d3l8ua_: 3l8u A: [180093] automated match to d1j85a_ |
Domain d3l8ub_: 3l8u B: [180094] automated match to d1j85a_ |
Timeline for Protein automated matches from c.116.1.0: automated matches: