PDB entry 3e5y

View 3e5y on RCSB PDB site
Description: Crystal structure of TrmH family RNA methyltransferase from Burkholderia pseudomallei
Class: transferase
Keywords: SSGCID, protein knot, deCODE, RNA methyltransferase, Methyltransferase, Transferase, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease
Deposited on 2008-08-14, released 2008-08-26
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.215
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TrmH family RNA methyltransferase
    Species: Burkholderia pseudomallei 305 [TaxId:425067]
    Gene: BURPS305_4843
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3e5ya_
  • Chain 'B':
    Compound: TrmH family RNA methyltransferase
    Species: Burkholderia pseudomallei 305 [TaxId:425067]
    Gene: BURPS305_4843
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3e5yb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3e5yA (A:)
gpgsmfnvvlvepeippntgnvirlcantgarlhlieplgfplddakmrragldyheyaq
mrvhrdwdafvaaeapdparmfafttrgsgrfhdrafepgdwfvfgaetrglapalvdrf
apeqrvrlpmrpgnrslnlsntvavvvfeawrqagfegga

    Sequence, based on observed residues (ATOM records): (download) 
    >3e5yA (A:)
mfnvvlvepeippntgnvirlcantgarlhlieplgfplddakmrragldyheyaqmrvh
rdwdafvaaeapdparmfafttrgsgrfhdrafepgdwfvfgaetrglapalvdrfapeq
rvrlpmrpgnrslnlsntvavvvfeawrqagfegga

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3e5yB (B:)
gpgsmfnvvlvepeippntgnvirlcantgarlhlieplgfplddakmrragldyheyaq
mrvhrdwdafvaaeapdparmfafttrgsgrfhdrafepgdwfvfgaetrglapalvdrf
apeqrvrlpmrpgnrslnlsntvavvvfeawrqagfegga

    Sequence, based on observed residues (ATOM records): (download) 
    >3e5yB (B:)
mfnvvlvepeippntgnvirlcantgarlhlieplgfpldqmrvhrdwdafvaaeapdpa
rmfafttrgsgrfhdrafepgdwfvfgaetrglapalvdrfapeqrvrlpmrpgnrslnl
sntvavvvfeawrqagfegga