PDB entry 3ief

View 3ief on RCSB PDB site
Description: Crystal structure of tRNA guanine-n1-methyltransferase from Bartonella henselae using MPCS.
Class: transferase, RNA binding protein
Keywords: NIAID, SSGCID, Seattle Structural Genomics Center for Infectious Diseases, Microcapillary Protein Crystallization System, MPCS, PSI-2, Protein Structure Initiative, Accelerated Technologies Center for Gene to 3D Structure, ATCG3D, Cytoplasm, Methyltransferase, S-adenosyl-L-methionine, Transferase, tRNA processing, protein knot, RNA BINDING PROTEIN
Deposited on 2009-07-22, released 2009-08-11
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-09-22, with a file datestamp of 2009-09-18.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.196
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tRNA (guanine-N(1)-)-methyltransferase
    Species: Bartonella henselae [TaxId:38323]
    Gene: trmD, BH15820
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3iefa_
  • Chain 'B':
    Compound: tRNA (guanine-N(1)-)-methyltransferase
    Species: Bartonella henselae [TaxId:38323]
    Gene: trmD, BH15820
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3iefb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3iefA (A:)
smkfqarvltlypemfpgflgcslagqalkqgiwsletvqirdfaldkhhsvddtpaggg
agmvmradvlaaaldscpndsprllmsprgrllnqayarslarssgvtlvcgrfegvder
iieareleevsigdyilsggetaalvlldaivrllpgvmgneisakcesfengllehpqy
trpavfegrgippvltsghhkaianwrqqqaesltrqrrpdlyalynknrqkt

    Sequence, based on observed residues (ATOM records): (download) 
    >3iefA (A:)
kfqarvltlypemfpgflgcslagqalkqgiwsletvqirdfasvddtpagggagmvmra
dvlaaaldscpndsprllmsprgrllnqayarslarssgvtlvcgrfegvderiiearel
eevsigdyilsggetaalvlldaivrllpgvmgneisakcesfengllehpqytrpavfe
grgippvltsghhkaianwrqqqaesltrqrrpdlyalynknrq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3iefB (B:)
smkfqarvltlypemfpgflgcslagqalkqgiwsletvqirdfaldkhhsvddtpaggg
agmvmradvlaaaldscpndsprllmsprgrllnqayarslarssgvtlvcgrfegvder
iieareleevsigdyilsggetaalvlldaivrllpgvmgneisakcesfengllehpqy
trpavfegrgippvltsghhkaianwrqqqaesltrqrrpdlyalynknrqkt

    Sequence, based on observed residues (ATOM records): (download) 
    >3iefB (B:)
kfqarvltlypemfpgflgcslagqalkqgiwsletvqirdfalsvddtpagggagmvmr
advlaaaldscpndsprllmsprgrllnqayarslarssgvtlvcgrfegvderiieare
leevsigdyilsggetaalvlldaivrllpgkcesfengllehpqytrpavfegrgippv
ltsghhkaianwrqqqaesltrqrrpdlyalynkn