Lineage for Protein: Eukaryotic ornithine decarboxylase (ODC)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2058388Fold b.49: Domain of alpha and beta subunits of F1 ATP synthase-like [50614] (3 superfamilies)
    barrel, closed; n=6, S=8; greek-key
  4. 2058686Superfamily b.49.2: Alanine racemase C-terminal domain-like [50621] (2 families) (S)
    the barrel is decorated with additional structures
  5. 2058722Family b.49.2.3: Eukaryotic ODC-like [88683] (2 protein domains)
    barrel is open with strands 4 and 5 having swapped their positions, compared to the alanine racemase barrel
  6. 2058739Protein Eukaryotic ornithine decarboxylase (ODC) [50625] (3 species)

Species:

  1. 2058740Human (Homo sapiens) [TaxId:9606] [50626] (1 PDB entry)
  2. 2058743Mouse (Mus musculus) [TaxId:10090] [50627] (1 PDB entry)
  3. 2058745Trypanosome (Trypanosoma brucei) [TaxId:5691] [50628] (5 PDB entries)
    Uniprot P07805
    1. Domains for 1f3t:
      1. 2058750Domain d1f3ta1: 1f3t A:14-43,A:284-422 [26493]
        Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
        complexed with plp, put
      2. 2058751Domain d1f3tb1: 1f3t B:14-43,B:284-422 [26494]
        Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
        complexed with plp, put
      3. 2058752Domain d1f3tc1: 1f3t C:14-43,C:284-409 [26495]
        Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
        complexed with plp, put
      4. 2058753Domain d1f3td1: 1f3t D:14-43,D:284-409 [26496]
        Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
        complexed with plp, put
    2. Domains for 1njj:
      1. 2058758Domain d1njja1: 1njj A:20-43,A:284-414 [91905]
        Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
        complexed with get, orx
      2. 2058759Domain d1njjb1: 1njj B:20-43,B:284-409 [91907]
        Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
        complexed with get, orx
      3. 2058760Domain d1njjc1: 1njj C:14-43,C:284-409 [91909]
        Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
        complexed with get, orx
      4. 2058761Domain d1njjd1: 1njj D:20-43,D:284-409 [91911]
        Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
        complexed with get, orx
    3. Domains for 1qu4:
      1. 2058762Domain d1qu4a1: 1qu4 A:35-43,A:284-411 [26497]
        Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
        complexed with plp
      2. 2058763Domain d1qu4b1: 1qu4 B:35-43,B:284-411 [26498]
        Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
        complexed with plp
      3. 2058764Domain d1qu4c1: 1qu4 C:35-43,C:284-411 [26499]
        Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
        complexed with plp
      4. 2058765Domain d1qu4d1: 1qu4 D:35-43,D:284-411 [26500]
        Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
        complexed with plp
    4. Domains for 1szr:
      1. 2058754Domain d1szra1: 1szr A:37-43,A:284-408 [112174]
        Other proteins in same PDB: d1szra2, d1szrb2, d1szrc2, d1szrd2
        complexed with orx, plg, pxp; mutant
      2. 2058755Domain d1szrb1: 1szr B:37-43,B:284-408 [112176]
        Other proteins in same PDB: d1szra2, d1szrb2, d1szrc2, d1szrd2
        complexed with orx, plg, pxp; mutant
      3. 2058756Domain d1szrc1: 1szr C:37-43,C:284-408 [112178]
        Other proteins in same PDB: d1szra2, d1szrb2, d1szrc2, d1szrd2
        complexed with orx, plg, pxp; mutant
      4. 2058757Domain d1szrd1: 1szr D:37-43,D:284-408 [112180]
        Other proteins in same PDB: d1szra2, d1szrb2, d1szrc2, d1szrd2
        complexed with orx, plg, pxp; mutant
    5. Domains for 2tod:
      1. 2058746Domain d2toda1: 2tod A:37-43,A:284-410 [26489]
        Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
        complexed with dmo, plp; mutant
      2. 2058747Domain d2todb1: 2tod B:37-43,B:284-410 [26490]
        Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
        complexed with dmo, plp; mutant
      3. 2058748Domain d2todc1: 2tod C:37-43,C:284-410 [26491]
        Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
        complexed with dmo, plp; mutant
      4. 2058749Domain d2todd1: 2tod D:37-43,D:284-410 [26492]
        Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
        complexed with dmo, plp; mutant

More info for Protein Eukaryotic ornithine decarboxylase (ODC) from b.49.2.3: Eukaryotic ODC-like

Timeline for Protein Eukaryotic ornithine decarboxylase (ODC) from b.49.2.3: Eukaryotic ODC-like: