Lineage for Species: Trypanosome (Trypanosoma brucei) [TaxId: 5691]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2390559Fold b.49: Domain of alpha and beta subunits of F1 ATP synthase-like [50614] (4 superfamilies)
    barrel, closed; n=6, S=8; greek-key
    Many cradle-loop superfamilies may be homologous, according to PubMed 18457946
  4. 2390884Superfamily b.49.2: Alanine racemase C-terminal domain-like [50621] (2 families) (S)
    the barrel is decorated with additional structures
  5. 2390920Family b.49.2.3: Eukaryotic ODC-like [88683] (2 protein domains)
    barrel is open with strands 4 and 5 having swapped their positions, compared to the alanine racemase barrel
  6. 2390937Protein Eukaryotic ornithine decarboxylase (ODC) [50625] (3 species)
  7. 2390943Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [50628] (5 PDB entries)
    Uniprot P07805

PDB entries in Species: Trypanosome (Trypanosoma brucei) [TaxId: 5691]:

  1. Domain(s) for 1f3t:
    1. 2390948Domain d1f3ta1: 1f3t A:14-43,A:284-422 [26493]
      Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
      complexed with plp, put
    2. 2390949Domain d1f3tb1: 1f3t B:14-43,B:284-422 [26494]
      Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
      complexed with plp, put
    3. 2390950Domain d1f3tc1: 1f3t C:14-43,C:284-409 [26495]
      Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
      complexed with plp, put
    4. 2390951Domain d1f3td1: 1f3t D:14-43,D:284-409 [26496]
      Other proteins in same PDB: d1f3ta2, d1f3tb2, d1f3tc2, d1f3td2
      complexed with plp, put
  2. Domain(s) for 1njj:
    1. 2390956Domain d1njja1: 1njj A:20-43,A:284-414 [91905]
      Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
      complexed with get, orx
    2. 2390957Domain d1njjb1: 1njj B:20-43,B:284-409 [91907]
      Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
      complexed with get, orx
    3. 2390958Domain d1njjc1: 1njj C:14-43,C:284-409 [91909]
      Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
      complexed with get, orx
    4. 2390959Domain d1njjd1: 1njj D:20-43,D:284-409 [91911]
      Other proteins in same PDB: d1njja2, d1njjb2, d1njjc2, d1njjd2
      complexed with get, orx
  3. Domain(s) for 1qu4:
    1. 2390960Domain d1qu4a1: 1qu4 A:35-43,A:284-411 [26497]
      Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
      complexed with plp
    2. 2390961Domain d1qu4b1: 1qu4 B:35-43,B:284-411 [26498]
      Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
      complexed with plp
    3. 2390962Domain d1qu4c1: 1qu4 C:35-43,C:284-411 [26499]
      Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
      complexed with plp
    4. 2390963Domain d1qu4d1: 1qu4 D:35-43,D:284-411 [26500]
      Other proteins in same PDB: d1qu4a2, d1qu4b2, d1qu4c2, d1qu4d2
      complexed with plp
  4. Domain(s) for 1szr:
    1. 2390952Domain d1szra1: 1szr A:37-43,A:284-408 [112174]
      Other proteins in same PDB: d1szra2, d1szrb2, d1szrc2, d1szrd2
      complexed with orx, plg, pxp; mutant
    2. 2390953Domain d1szrb1: 1szr B:37-43,B:284-408 [112176]
      Other proteins in same PDB: d1szra2, d1szrb2, d1szrc2, d1szrd2
      complexed with orx, plg, pxp; mutant
    3. 2390954Domain d1szrc1: 1szr C:37-43,C:284-408 [112178]
      Other proteins in same PDB: d1szra2, d1szrb2, d1szrc2, d1szrd2
      complexed with orx, plg, pxp; mutant
    4. 2390955Domain d1szrd1: 1szr D:37-43,D:284-408 [112180]
      Other proteins in same PDB: d1szra2, d1szrb2, d1szrc2, d1szrd2
      complexed with orx, plg, pxp; mutant
  5. Domain(s) for 2tod:
    1. 2390944Domain d2toda1: 2tod A:37-43,A:284-410 [26489]
      Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
      complexed with dmo, plp; mutant
    2. 2390945Domain d2todb1: 2tod B:37-43,B:284-410 [26490]
      Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
      complexed with dmo, plp; mutant
    3. 2390946Domain d2todc1: 2tod C:37-43,C:284-410 [26491]
      Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
      complexed with dmo, plp; mutant
    4. 2390947Domain d2todd1: 2tod D:37-43,D:284-410 [26492]
      Other proteins in same PDB: d2toda2, d2todb2, d2todc2, d2todd2
      complexed with dmo, plp; mutant

More info for Species Trypanosome (Trypanosoma brucei) [TaxId:5691] from b.49.2.3 Eukaryotic ornithine decarboxylase (ODC)

Timeline for Species Trypanosome (Trypanosoma brucei) [TaxId:5691] from b.49.2.3 Eukaryotic ornithine decarboxylase (ODC):