SCOPe 2.08: Domain d1d7ka1: 1d7k A:7-43,A:284-427

Lineage for d1d7ka1 (1d7k A:7-43,A:284-427)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.49: Domain of alpha and beta subunits of F1 ATP synthase-like [50614] (4 superfamilies)
   barrel, closed; n=6, S=8; greek-key
   Many cradle-loop superfamilies may be homologous, according to PubMed 18457946

4. Superfamily b.49.2: Alanine racemase C-terminal domain-like [50621] (2 families)
   the barrel is decorated with additional structures

5. Family b.49.2.3: Eukaryotic ODC-like [88683] (2 proteins)
   barrel is open with strands 4 and 5 having swapped their positions, compared to the alanine racemase barrel

6. Protein Eukaryotic ornithine decarboxylase (ODC) [50625] (3 species)

7. Species Human (Homo sapiens) [TaxId:9606] [50626] (1 PDB entry)

8. Domain d1d7ka1: 1d7k A:7-43,A:284-427 [26486]
   Other proteins in same PDB: d1d7ka2, d1d7kb2

Details for d1d7ka1

PDB Entry: 1d7k, 2.1 Å

PDB Description: crystal structure of human ornithine decarboxylase at 2.1 angstroms resolution

PDB Compounds: (A:) human ornithine decarboxylase

SCOPe Domain Sequences for d1d7ka1:

Sequence, based on SEQRES records:

>d1d7ka1 b.49.2.3 (A:7-43,A:284-427) Eukaryotic ornithine decarboxylase (ODC) {Human (Homo sapiens) [TaxId: 9606]}
eefdchfldegftakdildqkinevsssddkdafyvaXftlavniiakkivlkeqtgsdd
edesseqtfmyyvndgvygsfncilydhahvkpllqkrpkpderyysssiwgptcdgldr
ivercdlpemhvgdwmlfenmgaytvaaastfngfqrptiyyvmsgpawqlmqqfqnpdf
pp

Sequence, based on observed residues (ATOM records):

>d1d7ka1 b.49.2.3 (A:7-43,A:284-427) Eukaryotic ornithine decarboxylase (ODC) {Human (Homo sapiens) [TaxId: 9606]}
eefdchfldegftakdildqkinevsssddkdafyvaXftlavniiakkivlkeqteqtf
myyvndgvygsfncilydhahvkpllqkrpkpderyysssiwgptcdgldrivercdlpe
mhvgdwmlfenmgaytvaaastfngfqrptiyyvmsgpawqlmqqfqnpdfpp

Timeline for d1d7ka1:

• d1d7ka1 first appeared (with stable ids) in SCOP 1.55
  
• d1d7ka1 appears in SCOPe 2.07