SCOPe 2.08: Domain d4c2mb_: 4c2m B:

Lineage for d4c2mb_ (4c2m B:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily)
   Multidomain subunits of complex domain organization

4. Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (3 families)
   The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit

5. Family e.29.1.1: RNA-polymerase beta [64485] (4 proteins)

6. Protein RNA polymerase I subunit A135 [346117] (1 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [346414] (3 PDB entries)

8. Domain d4c2mb_: 4c2m B: [343920]
   Other proteins in same PDB: d4c2m1_, d4c2m2_, d4c2m3_, d4c2ma_, d4c2mc1, d4c2mc2, d4c2me1, d4c2me2, d4c2mf_, d4c2mg1, d4c2mh_, d4c2mi1, d4c2mi2, d4c2mj_, d4c2mk_, d4c2ml_, d4c2mm_, d4c2mn_, d4c2mp_, d4c2mr1, d4c2mr2, d4c2mt1, d4c2mt2, d4c2mu_, d4c2mv1, d4c2mw_, d4c2mx1, d4c2mx2, d4c2my_, d4c2mz_
   automated match to d4c3hb_
   complexed with so4, zn

Details for d4c2mb_

PDB Entry: 4c2m, 2.8 Å

PDB Description: structure of rna polymerase i at 2.8 a resolution

PDB Compounds: (B:) DNA-directed RNA polymerase I subunit rpa135

SCOPe Domain Sequences for d4c2mb_:

Sequence, based on SEQRES records:

>d4c2mb_ e.29.1.1 (B:) RNA polymerase I subunit A135 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
pgqartadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkd
igekvifdgkplnsedeisnsgylgnklsvsveqvsiakpmsndgvssaverkvypsesr
qrltsyrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkees
deiggyfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqt
nvlhylndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrle
lllrgfkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgs
qdkfrmllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaq
vrmdinrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlqqvsgytvv
aekinfyrfishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfah
kcristqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadt
lrywkvegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpf
eqvymniavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmg
tpgvalchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddam
iinksadergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpy
igtyveegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyri
rrtpqigdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfvesl
agkagalhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiy
vgvvyyqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfl
lqdrllnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklltksed
gekifiddsqiwedgqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk

Sequence, based on observed residues (ATOM records):

>d4c2mb_ e.29.1.1 (B:) RNA polymerase I subunit A135 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
pgqartadfrtleresrfinppkdksafpllqeavqphigsfnaltegpdggllnlgvkd
igekvifdgkplnsnsgylgnklsvsveqvsiakpmsndgvssaverkvypsesrqrlts
yrgklllklkwsvnngeenlfevrdcgglpvmlqsnrchlnkmspyelvqhkeesdeigg
yfivngieklirmlivqrrnhpmaiirpsfanrgasyshygiqirsvrpdqtsqtnvlhy
lndgqvtfrfswrkneylvpvvmilkalchtsdreifdgiigndvkdsfltdrlelllrg
fkkryphlqnrtqvlqylgdkfrvvfqaspdqsdlevgqevldrivlvhlgkdgsqdkfr
mllfmirklyslvagecspdnpdatqhqevllggflygmilkekideylqniiaqvrmdi
nrgmainfkdkrymsrvlmrvnenigskmqyflstgnlvsqsgldlqqvsgytvvaekin
fyrfishfrmvhrgsffaqlktttvrkllpeswgflcpvhtpdgspcgllnhfahkcris
tqqsdvsripsilyslgvapashtfaagpslccvqidgkiigwvsheqgkiiadtlrywk
vegktpglpidleigyvppstrgqypglylfgghsrmlrpvrylpldkedivgpfeqvym
niavtpqeiqnnvhthveftptnilsilanltpfsdfnqsprnmyqcqmgkqtmgtpgva
lchrsdnklyrlqtgqtpivkanlyddygmdnfpngfnavvavisytgydmddamiinks
adergfgygtmyktekvdlalnrnrgdpitqhfgfgndewpkewlekldedglpyigtyv
eegdpicayfddtlnktkiktyhssepayieevnligdesnkfqelqtvsikyrirrtpq
igdkfssrhgqkgvcsrkwptidmpfsetgiqpdiiinphafpsrmtigmfveslagkag
alhgiaqdstpwifneddtpadyfgeqlakagynyhgnepmysgatgeelradiyvgvvy
yqrlrhmvndkfqvrstgpvnsltmqpvkgrkrhggirvgemerdalighgtsfllqdrl
lnssdytqasvcrecgsilttqqsvprigsistvccrrcsmrfedakklifiddsqiwed
gqgnkfvggnetttvaipfvlkyldselsamgirlrynvepk

Timeline for d4c2mb_:

• d4c2mb_ first appeared in SCOPe 2.07