SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

Fold d.148: Hect, E3 ligase catalytic domain [56203] (1 superfamily)
consists of two alpha+beta domains; the N-terminal domain is array of helices and beta-hairpins; the C-terminal domain is an a/b sandwich with one left-handed beta-alpha(n)-beta unit; conformational flexibility of domain orientation

Superfamily d.148.1: Hect, E3 ligase catalytic domain [56204] (2 families)
automatically mapped to Pfam PF00632
Family d.148.1.0: automated matches [227207] (1 protein)
not a true family
Protein automated matches [226939] (2 species)
not a true protein

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [314772] (1 PDB entry)
- Domains for 5hpl:
  1. Domain d5hpla_: 5hpl A: [314875]
    Other proteins in same PDB: d5hplc1, d5hplc2, d5hpld1, d5hpld2
    automated match to d2xbba_
  2. Domain d5hplb_: 5hpl B: [314773]
    Other proteins in same PDB: d5hplc1, d5hplc2, d5hpld1, d5hpld2
    automated match to d2xbba_
Human (Homo sapiens) [TaxId:9606] [225255] (18 PDB entries)
1. Domain for 1zvd:
  - Domain d1zvda_: 1zvd A: [230463]
    automated match to d3tuga_
    complexed with na, po4
2. Domain for 2oni:
  - Domain d2onia1: 2oni A:574-946 [205341]
    Other proteins in same PDB: d2onia2
    automated match to d1nd7a_
    complexed with na
3. Domains for 2xbb:
  1. Domain d2xbba_: 2xbb A: [231566]
    Other proteins in same PDB: d2xbbc_, d2xbbd_
    automated match to d2onia_
    complexed with gol
  2. Domain d2xbbb_: 2xbb B: [231567]
    Other proteins in same PDB: d2xbbc_, d2xbbd_
    automated match to d2onia_
    complexed with gol
4. Domain for 2xbf:
  - Domain d2xbfa_: 2xbf A: [231568]
    automated match to d2onia_
    complexed with ca, edo
5. Domain for 3h1d:
  - Domain d3h1da1: 3h1d A:3993-4366 [232357]
    Other proteins in same PDB: d3h1da2
    automated match to d2onia_
    complexed with so4
6. Domains for 3jw0:
  1. Domain d3jw0c1: 3jw0 C:576-950 [247066]
    Other proteins in same PDB: d3jw0a_, d3jw0b_, d3jw0c2, d3jw0x_, d3jw0y_
    automated match to d4bbna_
  2. Domain d3jw0d_: 3jw0 D: [247067]
    Other proteins in same PDB: d3jw0a_, d3jw0b_, d3jw0c2, d3jw0x_, d3jw0y_
    automated match to d4bbna_
7. Domain for 4bbn:
  - Domain d4bbna1: 4bbn A:519-895 [234144]
    Other proteins in same PDB: d4bbna2, d4bbnc_, d4bbnf_
    automated match to d2onia_
8. Domain for 4be8:
  - Domain d4be8a1: 4be8 A:519-894 [251225]
    Other proteins in same PDB: d4be8a2
    automated match to d4bbna_
9. Domain for 4y07:
  - Domain d4y07a_: 4y07 A: [279045]
    automated match to d4bbna_
10. Domains for 5c7j:
  1. Domain d5c7ja_: 5c7j A: [312674]
    Other proteins in same PDB: d5c7jc1, d5c7jc2, d5c7jd1, d5c7jd2
    automated match to d2xbba_
  2. Domain d5c7jb_: 5c7j B: [312825]
    Other proteins in same PDB: d5c7jc1, d5c7jc2, d5c7jd1, d5c7jd2
    automated match to d2xbba_
11. Domain for 5c7m:
  - Domain d5c7ma_: 5c7m A: [312779]
    Other proteins in same PDB: d5c7mb_, d5c7mc_
    automated match to d2xbba_
12. Domain for 5c91:
  - Domain d5c91a_: 5c91 A: [277506]
    automated match to d4bbna_
    complexed with 4yu
13. Domain for 5hpk:
  - Domain d5hpka1: 5hpk A:574-949 [316732]
    Other proteins in same PDB: d5hpka2, d5hpkb1, d5hpkb2
    automated match to d5c7jb_
14. Domain for 5hps:
  - Domain d5hpsa_: 5hps A: [315509]
    Other proteins in same PDB: d5hpsb_
    automated match to d4y07a_
15. Domains for 5hpt:
  1. Domain d5hpta_: 5hpt A: [316098]
    Other proteins in same PDB: d5hptb_, d5hptc_, d5hpte_, d5hptf_, d5hpth_
    automated match to d4y07a_
  2. Domain d5hptd_: 5hpt D: [316127]
    Other proteins in same PDB: d5hptb_, d5hptc_, d5hpte_, d5hptf_, d5hpth_
    automated match to d4y07a_
  3. Domain d5hptg_: 5hpt G: [316169]
    Other proteins in same PDB: d5hptb_, d5hptc_, d5hpte_, d5hptf_, d5hpth_
    automated match to d4y07a_
16. Domain for 5tjq:
  - Domain d5tjqa_: 5tjq A: [335015]
    automated match to d4y07a_
17. Domains for 6jx5:
  1. Domain d6jx5a_: 6jx5 A: [377664]
    automated match to d5c7jb_
  2. Domain d6jx5b_: 6jx5 B: [377665]
    automated match to d5c7jb_
  3. Domain d6jx5c_: 6jx5 C: [377676]
    automated match to d5c7jb_
18. Domain for 7m3q:
  - Domain d7m3qa_: 7m3q A: [403541]
    Other proteins in same PDB: d7m3qb_
    automated match to d5c7jb_
    complexed with cl, dtt, edo, na, so4

More info for Protein automated matches from d.148.1.0: automated matches

Timeline for Protein automated matches from d.148.1.0: automated matches:

Protein automated matches from d.148.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from d.148.1.0: automated matches appears in SCOPe 2.07