Lineage for d5hpka1 (5hpk A:574-949)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2548233Fold d.148: Hect, E3 ligase catalytic domain [56203] (1 superfamily)
    consists of two alpha+beta domains; the N-terminal domain is array of helices and beta-hairpins; the C-terminal domain is an a/b sandwich with one left-handed beta-alpha(n)-beta unit; conformational flexibility of domain orientation
  4. 2548234Superfamily d.148.1: Hect, E3 ligase catalytic domain [56204] (2 families) (S)
    automatically mapped to Pfam PF00632
  5. 2548250Family d.148.1.0: automated matches [227207] (1 protein)
    not a true family
  6. 2548251Protein automated matches [226939] (2 species)
    not a true protein
  7. 2548255Species Human (Homo sapiens) [TaxId:9606] [225255] (17 PDB entries)
  8. 2548264Domain d5hpka1: 5hpk A:574-949 [316732]
    Other proteins in same PDB: d5hpka2, d5hpkb1, d5hpkb2
    automated match to d5c7jb_

Details for d5hpka1

PDB Entry: 5hpk (more details), 2.43 Å

PDB Description: system-wide modulation of hect e3 ligases with selective ubiquitin variant probes: nedd4l and ubv nl.1
PDB Compounds: (A:) E3 ubiquitin-protein ligase NEDD4-like

SCOPe Domain Sequences for d5hpka1:

Sequence, based on SEQRES records: (download)

>d5hpka1 d.148.1.0 (A:574-949) automated matches {Human (Homo sapiens) [TaxId: 9606]}
srefkqkydyfrkklkkpadipnrfemklhrnnifeesyrrimsvkrpdvlkarlwiefe
sekgldyggvarewffllskemfnpyyglfeysatdnytlqinpnsglcnedhlsyftfi
grvaglavfhgklldgffirpfykmmlgkqitlndmesvdseyynslkwilendpteldl
mfcideenfgqtyqvdlkpngseimvtnenkreyidlviqwrfvnrvqkqmnaflegfte
llpidlikifdenelellmcglgdvdvndwrqhsiykngycpnhpviqwfwkavllmdae
krirllqfvtgtsrvpmngfaelygsngpqlftieqwgspeklprahtcfnrldlppyet
fedlrekllmavenaq

Sequence, based on observed residues (ATOM records): (download)

>d5hpka1 d.148.1.0 (A:574-949) automated matches {Human (Homo sapiens) [TaxId: 9606]}
srefkqkydyfrkklkkpadipnrfemklhrnnifeesyrrimsvkrpdvlkarlwiefe
dyggvarewffllskemfnpyyglfeysatdnytlqinpnsglcnedhlsyftfigrvag
lavfhgklldgffirpfykmmlgkqitlndmesvdseyynslkwilendpteldlmfcid
eenfgqtyqvdlkpngseimvtnenkreyidlviqwrfvnrvqkqmnaflegftellpid
likifdenelellmcglgdvdvndwrqhsiykngycpnhpviqwfwkavllmdaekrirl
lqfvtgtsrvpmngfaelygsngpqlftieqwgspeklprahtcfnrldlppyetfedlr
ekllmavenaq

SCOPe Domain Coordinates for d5hpka1:

Click to download the PDB-style file with coordinates for d5hpka1.
(The format of our PDB-style files is described here.)

Timeline for d5hpka1:

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Domains from same chain:
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d5hpka2