SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
Fold d.42: POZ domain [54694] (1 superfamily)
core: beta(2)-alpha(2)-beta(2)-alpha(2); 2 layers a/b; mixed sheet: 2143
Superfamily d.42.1: POZ domain [54695] (3 families)
Family d.42.1.0: automated matches [191460] (1 protein)
not a true family
Protein automated matches [190710] (3 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [187857] (25 PDB entries)
1. Domain for 2e31:
  - Domain d2e31b1: 2e31 B:2-65 [204056]
    Other proteins in same PDB: d2e31b2
    automated match to d2ovra2
2. Domain for 2if5:
  - Domain d2if5a_: 2if5 A: [165531]
    automated match to d1buoa_
    complexed with pr
3. Domains for 2ihc:
  1. Domain d2ihca_: 2ihc A: [165544]
    automated match to d1r28a_
  2. Domain d2ihcb_: 2ihc B: [165545]
    automated match to d1r28a_
  3. Domain d2ihcc_: 2ihc C: [165546]
    automated match to d1r28a_
  4. Domain d2ihcd_: 2ihc D: [165547]
    automated match to d1r28a_
4. Domains for 2nn2:
  1. Domain d2nn2a_: 2nn2 A: [166308]
    automated match to d1buoa_
  2. Domain d2nn2b_: 2nn2 B: [166309]
    automated match to d1buoa_
5. Domain for 2ppi:
  - Domain d2ppia_: 2ppi A: [205587]
    automated match to d2nn2a_
6. Domains for 2q81:
  1. Domain d2q81a_: 2q81 A: [167466]
    automated match to d1r28a_
    complexed with pg4
  2. Domain d2q81b_: 2q81 B: [167467]
    automated match to d1r28a_
    complexed with pg4
  3. Domain d2q81c_: 2q81 C: [167468]
    automated match to d1r28a_
    complexed with pg4
  4. Domain d2q81d_: 2q81 D: [167469]
    automated match to d1r28a_
    complexed with pg4
7. Domain for 2vpk:
  - Domain d2vpka_: 2vpk A: [168760]
    automated match to d1r28a_
8. Domain for 3b84:
  - Domain d3b84a_: 3b84 A: [172486]
    automated match to d1r28a_
    complexed with edo, unk
9. Domain for 3fkc:
  - Domain d3fkca_: 3fkc A: [196116]
    automated match to d2if5a_
10. Domains for 3ga1:
  1. Domain d3ga1a_: 3ga1 A: [199435]
    automated match to d3ga1b_
    complexed with no3
  2. Domain d3ga1b_: 3ga1 B: [196571]
    automated match to d3m52a_
    complexed with no3
11. Domain for 3m4t:
  - Domain d3m4ta_: 3m4t A: [196357]
    automated match to d2nn2a_
    complexed with so4
12. Domains for 3m52:
  1. Domain d3m52a_: 3m52 A: [180857]
    automated match to d1r28a_
    complexed with act, zn
  2. Domain d3m52b_: 3m52 B: [180858]
    automated match to d1r28a_
    complexed with act, zn
13. Domains for 3m5b:
  1. Domain d3m5ba_: 3m5b A: [180859]
    automated match to d1buoa_
  2. Domain d3m5bb_: 3m5b B: [180860]
    automated match to d1buoa_
14. Domain for 3m8v:
  - Domain d3m8va_: 3m8v A: [213159]
    automated match to d3m4ta_
15. Domains for 3ohu:
  1. Domain d3ohua_: 3ohu A: [183035]
    automated match to d1r28a_
  2. Domain d3ohub_: 3ohu B: [183036]
    automated match to d1r28a_
  3. Domain d3ohuc_: 3ohu C: [183037]
    automated match to d1r28a_
  4. Domain d3ohud_: 3ohu D: [183038]
    automated match to d1r28a_
  5. Domain d3ohue_: 3ohu E: [183039]
    automated match to d1r28a_
  6. Domain d3ohuf_: 3ohu F: [183040]
    automated match to d1r28a_
16. Domains for 3ohv:
  1. Domain d3ohva_: 3ohv A: [183041]
    automated match to d1r28a_
  2. Domain d3ohvb_: 3ohv B: [183042]
    automated match to d1r28a_
  3. Domain d3ohvc_: 3ohv C: [183043]
    automated match to d1r28a_
  4. Domain d3ohvd_: 3ohv D: [183044]
    automated match to d1r28a_
  5. Domain d3ohve_: 3ohv E: [183045]
    automated match to d1r28a_
  6. Domain d3ohvf_: 3ohv F: [183046]
    automated match to d1r28a_
17. Domain for 3wso:
  - Domain d3wsob1: 3wso B:1-69 [270794]
    Other proteins in same PDB: d3wsob2
    automated match to d4i6jc1
18. Domains for 4cp3:
  1. Domain d4cp3a_: 4cp3 A: [237787]
    automated match to d1buoa_
    complexed with rbt
  2. Domain d4cp3b_: 4cp3 B: [237788]
    automated match to d1buoa_
    complexed with rbt
19. Domain for 4cxi:
  - Domain d4cxia_: 4cxi A: [256732]
    automated match to d3ohua_
20. Domain for 4cxj:
  - Domain d4cxja_: 4cxj A: [256733]
    automated match to d3ohua_
    mutant
21. Domain for 4cxt:
  - Domain d4cxta_: 4cxt A: [266109]
    automated match to d4cxja_
    complexed with sxj
22. Domain for 4i6j:
  - Domain d4i6jc1: 4i6j C:3-64 [222959]
    Other proteins in same PDB: d4i6ja1, d4i6jc2
    automated match to d2ovra2
23. Domains for 4u2n:
  1. Domain d4u2na1: 4u2n A:1-105 [261709]
    automated match to d3ga1b_
  2. Domain d4u2na2: 4u2n A:128-248 [261712]
    automated match to d3ga1b_
  3. Domain d4u2nb1: 4u2n B:1-105 [261708]
    automated match to d3ga1b_
  4. Domain d4u2nb2: 4u2n B:128-248 [261711]
    automated match to d3ga1b_
24. Domains for 5bxb:
  1. Domain d5bxba_: 5bxb A: [276502]
    automated match to d3kvta_
  2. Domain d5bxbb_: 5bxb B: [276503]
    automated match to d3kvta_
  3. Domain d5bxbc_: 5bxb C: [276505]
    automated match to d3kvta_
  4. Domain d5bxbd_: 5bxb D: [276506]
    automated match to d3kvta_
  5. Domain d5bxbe_: 5bxb E: [276507]
    automated match to d3kvta_
  6. Domain d5bxbf_: 5bxb F: [276508]
    automated match to d3kvta_
  7. Domain d5bxbg_: 5bxb G: [276509]
    automated match to d3kvta_
  8. Domain d5bxbh_: 5bxb H: [276510]
    automated match to d3kvta_
  9. Domain d5bxbi_: 5bxb I: [276511]
    automated match to d3kvta_
  10. Domain d5bxbj_: 5bxb J: [276512]
    automated match to d3kvta_
25. Domains for 5bxd:
  1. Domain d5bxda_: 5bxd A: [276513]
    automated match to d3kvta_
  2. Domain d5bxdb_: 5bxd B: [276514]
    automated match to d3kvta_
  3. Domain d5bxdc_: 5bxd C: [276515]
    automated match to d3kvta_
  4. Domain d5bxdd_: 5bxd D: [276517]
    automated match to d3kvta_
  5. Domain d5bxde_: 5bxd E: [276516]
    automated match to d3kvta_
Mouse (Mus musculus) [TaxId:10090] [188594] (2 PDB entries)
1. Domains for 2yy9:
  1. Domain d2yy9a_: 2yy9 A: [207739]
    automated match to d3b84a_
  2. Domain d2yy9b_: 2yy9 B: [207740]
    automated match to d3b84a_
2. Domain for 2z8h:
  - Domain d2z8ha_: 2z8h A: [171104]
    automated match to d3bimb1
Thale cress (Arabidopsis thaliana) [TaxId:3702] [225248] (3 PDB entries)
1. Domain for 2p1m:
  - Domain d2p1ma1: 2p1m A:8-58 [205407]
    Other proteins in same PDB: d2p1ma2
    automated match to d2ovra2
    complexed with ihp
2. Domain for 2p1p:
  - Domain d2p1pa1: 2p1p A:8-47 [205409]
    Other proteins in same PDB: d2p1pa2
    automated match to d2ovra2
    complexed with iac, ihp
3. Domain for 3c6p:
  - Domain d3c6pa1: 3c6p A:8-58 [208804]
    Other proteins in same PDB: d3c6pa2
    automated match to d2ovra2
    complexed with 2s3, ihp

More info for Protein automated matches from d.42.1.0: automated matches

Timeline for Protein automated matches from d.42.1.0: automated matches:

Protein automated matches from d.42.1.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from d.42.1.0: automated matches appears in SCOPe 2.04
Protein automated matches from d.42.1.0: automated matches appears in SCOPe 2.06
Protein automated matches from d.42.1.0: automated matches appears in the current release, SCOPe 2.08