Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2945442Fold d.42: POZ domain [54694] (1 superfamily)
    core: beta(2)-alpha(2)-beta(2)-alpha(2); 2 layers a/b; mixed sheet: 2143
  4. 2945443Superfamily d.42.1: POZ domain [54695] (3 families) (S)
  5. 2945784Family d.42.1.0: automated matches [191460] (1 protein)
    not a true family
  6. 2945785Protein automated matches [190710] (5 species)
    not a true protein

Species:

  1. 2945786Human (Homo sapiens) [TaxId:9606] [187857] (54 PDB entries)
    1. Domain for 2e31:
    2. Domain for 2if5:
    3. Domains for 2ihc:
      1. 2945832Domain d2ihca_: 2ihc A: [165544]
        Other proteins in same PDB: d2ihcb2, d2ihcc2
        automated match to d1r28a_
      2. 2945833Domain d2ihcb1: 2ihc B:7-120 [165545]
        Other proteins in same PDB: d2ihcb2, d2ihcc2
        automated match to d1r28a_
      3. 2945834Domain d2ihcc1: 2ihc C:7-127 [165546]
        Other proteins in same PDB: d2ihcb2, d2ihcc2
        automated match to d1r28a_
      4. 2945835Domain d2ihcd_: 2ihc D: [165547]
        Other proteins in same PDB: d2ihcb2, d2ihcc2
        automated match to d1r28a_
    4. Domains for 2nn2:
      1. 2945810Domain d2nn2a_: 2nn2 A: [166308]
        automated match to d1buoa_
      2. 2945811Domain d2nn2b_: 2nn2 B: [166309]
        automated match to d1buoa_
    5. Domain for 2ppi:
    6. Domains for 2q81:
      1. 2945795Domain d2q81a1: 2q81 A:2-114 [167466]
        Other proteins in same PDB: d2q81a2, d2q81b2, d2q81c2
        automated match to d1r28a_
        complexed with pg4
      2. 2945796Domain d2q81b1: 2q81 B:2-115 [167467]
        Other proteins in same PDB: d2q81a2, d2q81b2, d2q81c2
        automated match to d1r28a_
        complexed with pg4
      3. 2945797Domain d2q81c1: 2q81 C:2-114 [167468]
        Other proteins in same PDB: d2q81a2, d2q81b2, d2q81c2
        automated match to d1r28a_
        complexed with pg4
      4. 2945798Domain d2q81d_: 2q81 D: [167469]
        Other proteins in same PDB: d2q81a2, d2q81b2, d2q81c2
        automated match to d1r28a_
        complexed with pg4
    7. Domain for 2vpk:
    8. Domain for 3b84:
    9. Domains for 3drz:
      1. 2945787Domain d3drza_: 3drz A: [305217]
        automated match to d5bxbc_
      2. 2945788Domain d3drzb_: 3drz B: [305218]
        automated match to d5bxbc_
      3. 2945789Domain d3drzc_: 3drz C: [305219]
        automated match to d5bxbc_
      4. 2945790Domain d3drzd_: 3drz D: [305220]
        automated match to d5bxbc_
      5. 2945791Domain d3drze_: 3drz E: [305221]
        automated match to d5bxbc_
    10. Domain for 3fkc:
    11. Domains for 3ga1:
      1. 2945799Domain d3ga1a_: 3ga1 A: [199435]
        automated match to d3ga1b_
        complexed with no3
      2. 2945800Domain d3ga1b_: 3ga1 B: [196571]
        automated match to d3m52a_
        complexed with no3
    12. Domain for 3m4t:
    13. Domains for 3m52:
      1. 2945847Domain d3m52a1: 3m52 A:1-115 [180857]
        Other proteins in same PDB: d3m52a2, d3m52b2
        automated match to d1r28a_
        complexed with act, zn
      2. 2945848Domain d3m52b1: 3m52 B:1-115 [180858]
        Other proteins in same PDB: d3m52a2, d3m52b2
        automated match to d1r28a_
        complexed with act, zn
    14. Domains for 3m5b:
      1. 2945792Domain d3m5ba_: 3m5b A: [180859]
        automated match to d1buoa_
      2. 2945793Domain d3m5bb_: 3m5b B: [180860]
        automated match to d1buoa_
    15. Domain for 3m8v:
    16. Domains for 3ohu:
      1. 2945803Domain d3ohua1: 3ohu A:9-129 [183035]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      2. 2945804Domain d3ohub_: 3ohu B: [183036]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      3. 2945805Domain d3ohuc_: 3ohu C: [183037]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      4. 2945806Domain d3ohud_: 3ohu D: [183038]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      5. 2945807Domain d3ohue_: 3ohu E: [183039]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      6. 2945808Domain d3ohuf_: 3ohu F: [183040]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
    17. Domains for 3ohv:
      1. 2945820Domain d3ohva1: 3ohv A:9-129 [183041]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      2. 2945821Domain d3ohvb_: 3ohv B: [183042]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      3. 2945822Domain d3ohvc_: 3ohv C: [183043]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      4. 2945823Domain d3ohvd_: 3ohv D: [183044]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      5. 2945824Domain d3ohve_: 3ohv E: [183045]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      6. 2945825Domain d3ohvf_: 3ohv F: [183046]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
    18. Domain for 3wso:
    19. Domains for 4cp3:
      1. 2945830Domain d4cp3a1: 4cp3 A:9-127 [237787]
        Other proteins in same PDB: d4cp3a2, d4cp3b2
        automated match to d1buoa_
        complexed with rbt
      2. 2945831Domain d4cp3b1: 4cp3 B:9-128 [237788]
        Other proteins in same PDB: d4cp3a2, d4cp3b2
        automated match to d1buoa_
        complexed with rbt
    20. Domain for 4crh:
    21. Domain for 4cxi:
    22. Domain for 4cxj:
    23. Domain for 4cxt:
    24. Domain for 4i6j:
    25. Domains for 4u2n:
      1. 2945853Domain d4u2na1: 4u2n A:2-105 [261709]
        Other proteins in same PDB: d4u2na3, d4u2nb3
        automated match to d3ga1b_
      2. 2945854Domain d4u2na2: 4u2n A:128-248 [261712]
        Other proteins in same PDB: d4u2na3, d4u2nb3
        automated match to d3ga1b_
      3. 2945855Domain d4u2nb1: 4u2n B:2-105 [261708]
        Other proteins in same PDB: d4u2na3, d4u2nb3
        automated match to d3ga1b_
      4. 2945856Domain d4u2nb2: 4u2n B:128-248 [261711]
        Other proteins in same PDB: d4u2na3, d4u2nb3
        automated match to d3ga1b_
    26. Domains for 4uij:
      1. 2945886Domain d4uija_: 4uij A: [309719]
        automated match to d5bxba_
        complexed with cl
      2. 2945887Domain d4uijb_: 4uij B: [309720]
        automated match to d5bxba_
        complexed with cl
      3. 2945888Domain d4uijc_: 4uij C: [309721]
        automated match to d5bxba_
        complexed with cl
      4. 2945889Domain d4uijd_: 4uij D: [309722]
        automated match to d5bxba_
        complexed with cl
    27. Domains for 5a15:
      1. 2945894Domain d5a15a_: 5a15 A: [342222]
        automated match to d3drzc_
      2. 2945895Domain d5a15b_: 5a15 B: [342223]
        automated match to d3drzc_
      3. 2945896Domain d5a15c_: 5a15 C: [342367]
        automated match to d3drzc_
      4. 2945897Domain d5a15d_: 5a15 D: [342217]
        automated match to d3drzc_
      5. 2945898Domain d5a15e_: 5a15 E: [342219]
        automated match to d3drzc_
      6. 2945899Domain d5a15f_: 5a15 F: [342274]
        automated match to d3drzc_
      7. 2945900Domain d5a15g_: 5a15 G: [342425]
        automated match to d3drzc_
      8. 2945901Domain d5a15h_: 5a15 H: [342221]
        automated match to d3drzc_
      9. 2945902Domain d5a15i_: 5a15 I: [342218]
        automated match to d3drzc_
      10. 2945903Domain d5a15j_: 5a15 J: [342289]
        automated match to d3drzc_
      11. 2945904Domain d5a15k_: 5a15 K: [342327]
        automated match to d3drzc_
      12. 2945905Domain d5a15l_: 5a15 L: [342220]
        automated match to d3drzc_
      13. 2945906Domain d5a15m_: 5a15 M: [342399]
        automated match to d3drzc_
      14. 2945907Domain d5a15n_: 5a15 N: [342284]
        automated match to d3drzc_
      15. 2945908Domain d5a15o_: 5a15 O: [342321]
        automated match to d3drzc_
    28. Domains for 5a6r:
      1. 2945913Domain d5a6ra_: 5a6r A: [310137]
        automated match to d5bxbc_
      2. 2945914Domain d5a6rb_: 5a6r B: [310138]
        automated match to d5bxbc_
      3. 2945915Domain d5a6rc_: 5a6r C: [310139]
        automated match to d5bxbc_
      4. 2945916Domain d5a6rd_: 5a6r D: [310140]
        automated match to d5bxbc_
      5. 2945917Domain d5a6re_: 5a6r E: [310141]
        automated match to d5bxbc_
    29. Domains for 5bxb:
      1. 2945836Domain d5bxba1: 5bxb A:29-132 [276502]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      2. 2945837Domain d5bxbb1: 5bxb B:29-132 [276503]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      3. 2945838Domain d5bxbc1: 5bxb C:29-131 [276505]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      4. 2945839Domain d5bxbd1: 5bxb D:29-132 [276506]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      5. 2945840Domain d5bxbe1: 5bxb E:29-131 [276507]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      6. 2945841Domain d5bxbf1: 5bxb F:29-131 [276508]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      7. 2945842Domain d5bxbg1: 5bxb G:29-131 [276509]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      8. 2945843Domain d5bxbh1: 5bxb H:29-132 [276510]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      9. 2945844Domain d5bxbi1: 5bxb I:29-132 [276511]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      10. 2945845Domain d5bxbj1: 5bxb J:29-132 [276512]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
    30. Domains for 5bxd:
      1. 2945813Domain d5bxda_: 5bxd A: [276513]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
      2. 2945814Domain d5bxdb1: 5bxd B:29-130 [276514]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
      3. 2945815Domain d5bxdc1: 5bxd C:29-130 [276515]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
      4. 2945816Domain d5bxdd1: 5bxd D:29-132 [276517]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
      5. 2945817Domain d5bxde1: 5bxd E:29-132 [276516]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
    31. Domains for 5bxh:
      1. 2945928Domain d5bxha1: 5bxh A:4-106 [310317]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
      2. 2945929Domain d5bxhb1: 5bxh B:4-106 [310319]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
      3. 2945930Domain d5bxhc1: 5bxh C:4-106 [310321]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
      4. 2945931Domain d5bxhd1: 5bxh D:4-106 [310323]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
      5. 2945932Domain d5bxhe_: 5bxh E: [310325]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
    32. Domain for 5dad:
    33. Domain for 5daf:
    34. Domains for 5fta:
      1. 2945880Domain d5ftaa_: 5fta A: [314483]
        automated match to d4uesa_
        complexed with hg
      2. 2945881Domain d5ftab_: 5fta B: [314484]
        automated match to d4uesa_
        complexed with hg
      3. 2945882Domain d5ftac_: 5fta C: [314572]
        automated match to d4uesa_
        complexed with hg
      4. 2945883Domain d5ftad_: 5fta D: [314522]
        automated match to d4uesa_
        complexed with hg
    35. Domain for 5git:
    36. Domains for 5ibk:
      1. 2945876Domain d5ibka1: 5ibk A:1-70 [316811]
        Other proteins in same PDB: d5ibka2, d5ibka3, d5ibkc_, d5ibkd2, d5ibkf_
        automated match to d3wsob1
      2. 2945877Domain d5ibkd1: 5ibk D:1-68 [316800]
        Other proteins in same PDB: d5ibka2, d5ibka3, d5ibkc_, d5ibkd2, d5ibkf_
        automated match to d3wsob1
    37. Domain for 5jh5:
    38. Domain for 5k35:
    39. Domains for 5vzt:
      1. 2945933Domain d5vzta1: 5vzt A:1002-1069 [348329]
        Other proteins in same PDB: d5vzta2, d5vztc2
        automated match to d3wsob1
        complexed with dtt, po4, zn
      2. 2945934Domain d5vztc1: 5vzt C:1002-1069 [348349]
        Other proteins in same PDB: d5vzta2, d5vztc2
        automated match to d3wsob1
        complexed with dtt, po4, zn
    40. Domain for 5xyl:
    41. Domains for 6bva:
      1. 2945909Domain d6bvac1: 6bva C:1-75 [354823]
        Other proteins in same PDB: d6bvaa1, d6bvaa2, d6bvab_, d6bvac2, d6bvad2, d6bvad3
        automated match to d5k35b1
      2. 2945910Domain d6bvad1: 6bva D:1-75 [354827]
        Other proteins in same PDB: d6bvaa1, d6bvaa2, d6bvab_, d6bvac2, d6bvad2, d6bvad3
        automated match to d5k35b1
    42. Domains for 6byh:
      1. 2945891Domain d6byha1: 6byh A:1-70 [354829]
        Other proteins in same PDB: d6byha2, d6byha3, d6byhb2, d6byhb3, d6byhc1, d6byhc2, d6byhd1, d6byhd2, d6byhg2, d6byhg3, d6byhh1, d6byhh2
        automated match to d5k35b1
      2. 2945892Domain d6byhb1: 6byh B:1-71 [354909]
        Other proteins in same PDB: d6byha2, d6byha3, d6byhb2, d6byhb3, d6byhc1, d6byhc2, d6byhd1, d6byhd2, d6byhg2, d6byhg3, d6byhh1, d6byhh2
        automated match to d5k35b1
      3. 2945893Domain d6byhg1: 6byh G:1-69 [354826]
        Other proteins in same PDB: d6byha2, d6byha3, d6byhb2, d6byhb3, d6byhc1, d6byhc2, d6byhd1, d6byhd2, d6byhg2, d6byhg3, d6byhh1, d6byhh2
        automated match to d5k35b1
    43. Domain for 6ffm:
    44. Domain for 6i0q:
    45. Domains for 6n34:
      1. 2945936Domain d6n34a_: 6n34 A: [361195]
        automated match to d5gita_
      2. 2945937Domain d6n34b_: 6n34 B: [361184]
        automated match to d5gita_
    46. Domain for 6o60:
    47. Domains for 6ocr:
      1. 2945857Domain d6ocra_: 6ocr A: [367607]
        automated match to d3drza_
      2. 2945858Domain d6ocrb_: 6ocr B: [367582]
        automated match to d3drza_
      3. 2945859Domain d6ocrc_: 6ocr C: [367615]
        automated match to d3drza_
      4. 2945860Domain d6ocrd_: 6ocr D: [367625]
        automated match to d3drza_
      5. 2945861Domain d6ocre_: 6ocr E: [367687]
        automated match to d3drza_
      6. 2945862Domain d6ocrf_: 6ocr F: [367598]
        automated match to d3drza_
      7. 2945863Domain d6ocrg_: 6ocr G: [367622]
        automated match to d3drza_
      8. 2945864Domain d6ocrh_: 6ocr H: [367672]
        automated match to d3drza_
      9. 2945865Domain d6ocri_: 6ocr I: [367571]
        automated match to d3drza_
      10. 2945866Domain d6ocrj_: 6ocr J: [367594]
        automated match to d3drza_
      11. 2945867Domain d6ocrk_: 6ocr K: [367567]
        automated match to d3drza_
      12. 2945868Domain d6ocrl_: 6ocr L: [367572]
        automated match to d3drza_
      13. 2945869Domain d6ocrm_: 6ocr M: [367597]
        automated match to d3drza_
      14. 2945870Domain d6ocrn_: 6ocr N: [367573]
        automated match to d3drza_
      15. 2945871Domain d6ocro_: 6ocr O: [367565]
        automated match to d3drza_
    48. Domains for 6oct:
      1. 2945918Domain d6octa_: 6oct A: [367561]
        automated match to d3drza_
      2. 2945919Domain d6octb_: 6oct B: [367602]
        automated match to d3drza_
      3. 2945920Domain d6octc_: 6oct C: [367562]
        automated match to d3drza_
      4. 2945921Domain d6octd_: 6oct D: [367563]
        automated match to d3drza_
      5. 2945922Domain d6octe_: 6oct E: [367569]
        automated match to d3drza_
      6. 2945923Domain d6octf_: 6oct F: [367588]
        automated match to d3drza_
      7. 2945924Domain d6octg_: 6oct G: [367586]
        automated match to d3drza_
      8. 2945925Domain d6octh_: 6oct H: [367570]
        automated match to d3drza_
      9. 2945926Domain d6octi_: 6oct I: [367566]
        automated match to d3drza_
      10. 2945927Domain d6octj_: 6oct J: [367576]
        automated match to d3drza_
    49. Domain for 6vcd:
    50. Domain for 6w67:
    51. Domain for 6w68:
    52. Domain for 6w69:
    53. Domains for 7azw:
      1. 2945818Domain d7azwa1: 7azw A:1-114 [404463]
        Other proteins in same PDB: d7azwa2
        automated match to d5n1xb_
        complexed with gol
      2. 2945819Domain d7azwb_: 7azw B: [404462]
        Other proteins in same PDB: d7azwa2
        automated match to d5n1xb_
        complexed with gol
    54. Domain for 7exi:
  2. 2945939Mouse (Mus musculus) [TaxId:10090] [188594] (2 PDB entries)
    1. Domains for 2yy9:
      1. 2945941Domain d2yy9a1: 2yy9 A:8-116 [207739]
        Other proteins in same PDB: d2yy9a2, d2yy9b2
        automated match to d3b84a_
      2. 2945942Domain d2yy9b1: 2yy9 B:8-114 [207740]
        Other proteins in same PDB: d2yy9a2, d2yy9b2
        automated match to d3b84a_
    2. Domain for 2z8h:
  3. 2945943Norway rat (Rattus norvegicus) [TaxId:10116] [356377] (1 PDB entry)
  4. 2945948Thale cress (Arabidopsis thaliana) [TaxId:3702] [225248] (4 PDB entries)
    1. Domain for 2p1m:
    2. Domain for 2p1p:
    3. Domain for 3c6p:
    4. Domains for 6brp:
      1. 2945951Domain d6brpa1: 6brp A:4-61 [360454]
        Other proteins in same PDB: d6brpa2, d6brpc2
        automated match to d3wsob1
      2. 2945952Domain d6brpc1: 6brp C:4-65 [360394]
        Other proteins in same PDB: d6brpa2, d6brpc2
        automated match to d3wsob1
  5. 2945954Zebrafish (Danio rerio) [TaxId:7955] [375319] (1 PDB entry)

More info for Protein automated matches from d.42.1.0: automated matches

Timeline for Protein automated matches from d.42.1.0: automated matches: