Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2169177Fold d.42: POZ domain [54694] (1 superfamily)
    core: beta(2)-alpha(2)-beta(2)-alpha(2); 2 layers a/b; mixed sheet: 2143
  4. 2169178Superfamily d.42.1: POZ domain [54695] (3 families) (S)
  5. 2169402Family d.42.1.0: automated matches [191460] (1 protein)
    not a true family
  6. 2169403Protein automated matches [190710] (3 species)
    not a true protein

Species:

  1. 2169404Human (Homo sapiens) [TaxId:9606] [187857] (38 PDB entries)
    1. Domain for 2e31:
    2. Domain for 2if5:
    3. Domains for 2ihc:
      1. 2169448Domain d2ihca_: 2ihc A: [165544]
        Other proteins in same PDB: d2ihcb2, d2ihcc2
        automated match to d1r28a_
      2. 2169449Domain d2ihcb1: 2ihc B:7-120 [165545]
        Other proteins in same PDB: d2ihcb2, d2ihcc2
        automated match to d1r28a_
      3. 2169450Domain d2ihcc1: 2ihc C:7-127 [165546]
        Other proteins in same PDB: d2ihcb2, d2ihcc2
        automated match to d1r28a_
      4. 2169451Domain d2ihcd_: 2ihc D: [165547]
        Other proteins in same PDB: d2ihcb2, d2ihcc2
        automated match to d1r28a_
    4. Domains for 2nn2:
      1. 2169430Domain d2nn2a_: 2nn2 A: [166308]
        automated match to d1buoa_
      2. 2169431Domain d2nn2b_: 2nn2 B: [166309]
        automated match to d1buoa_
    5. Domain for 2ppi:
    6. Domains for 2q81:
      1. 2169417Domain d2q81a1: 2q81 A:2-114 [167466]
        Other proteins in same PDB: d2q81a2, d2q81b2, d2q81c2
        automated match to d1r28a_
        complexed with pg4
      2. 2169418Domain d2q81b1: 2q81 B:2-115 [167467]
        Other proteins in same PDB: d2q81a2, d2q81b2, d2q81c2
        automated match to d1r28a_
        complexed with pg4
      3. 2169419Domain d2q81c1: 2q81 C:2-114 [167468]
        Other proteins in same PDB: d2q81a2, d2q81b2, d2q81c2
        automated match to d1r28a_
        complexed with pg4
      4. 2169420Domain d2q81d_: 2q81 D: [167469]
        Other proteins in same PDB: d2q81a2, d2q81b2, d2q81c2
        automated match to d1r28a_
        complexed with pg4
    7. Domain for 2vpk:
    8. Domain for 3b84:
    9. Domains for 3drz:
      1. 2169407Domain d3drza_: 3drz A: [305217]
        automated match to d5bxbc_
      2. 2169408Domain d3drzb_: 3drz B: [305218]
        automated match to d5bxbc_
      3. 2169409Domain d3drzc_: 3drz C: [305219]
        automated match to d5bxbc_
      4. 2169410Domain d3drzd_: 3drz D: [305220]
        automated match to d5bxbc_
      5. 2169411Domain d3drze_: 3drz E: [305221]
        automated match to d5bxbc_
    10. Domain for 3fkc:
    11. Domains for 3ga1:
      1. 2169421Domain d3ga1a_: 3ga1 A: [199435]
        automated match to d3ga1b_
        complexed with no3
      2. 2169422Domain d3ga1b_: 3ga1 B: [196571]
        automated match to d3m52a_
        complexed with no3
    12. Domain for 3m4t:
    13. Domains for 3m52:
      1. 2169463Domain d3m52a1: 3m52 A:1-115 [180857]
        Other proteins in same PDB: d3m52a2, d3m52b2
        automated match to d1r28a_
        complexed with act, zn
      2. 2169464Domain d3m52b1: 3m52 B:1-115 [180858]
        Other proteins in same PDB: d3m52a2, d3m52b2
        automated match to d1r28a_
        complexed with act, zn
    14. Domains for 3m5b:
      1. 2169413Domain d3m5ba_: 3m5b A: [180859]
        automated match to d1buoa_
      2. 2169414Domain d3m5bb_: 3m5b B: [180860]
        automated match to d1buoa_
    15. Domain for 3m8v:
    16. Domains for 3ohu:
      1. 2169424Domain d3ohua1: 3ohu A:9-129 [183035]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      2. 2169425Domain d3ohub_: 3ohu B: [183036]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      3. 2169426Domain d3ohuc_: 3ohu C: [183037]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      4. 2169427Domain d3ohud_: 3ohu D: [183038]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      5. 2169428Domain d3ohue_: 3ohu E: [183039]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
      6. 2169429Domain d3ohuf_: 3ohu F: [183040]
        Other proteins in same PDB: d3ohua2
        automated match to d1r28a_
    17. Domains for 3ohv:
      1. 2169437Domain d3ohva1: 3ohv A:9-129 [183041]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      2. 2169438Domain d3ohvb_: 3ohv B: [183042]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      3. 2169439Domain d3ohvc_: 3ohv C: [183043]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      4. 2169440Domain d3ohvd_: 3ohv D: [183044]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      5. 2169441Domain d3ohve_: 3ohv E: [183045]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
      6. 2169442Domain d3ohvf_: 3ohv F: [183046]
        Other proteins in same PDB: d3ohva2
        automated match to d1r28a_
    18. Domain for 3wso:
    19. Domains for 4cp3:
      1. 2169445Domain d4cp3a1: 4cp3 A:9-127 [237787]
        Other proteins in same PDB: d4cp3a2, d4cp3b2
        automated match to d1buoa_
        complexed with rbt
      2. 2169446Domain d4cp3b1: 4cp3 B:9-128 [237788]
        Other proteins in same PDB: d4cp3a2, d4cp3b2
        automated match to d1buoa_
        complexed with rbt
    20. Domain for 4crh:
    21. Domain for 4cxi:
    22. Domain for 4cxj:
    23. Domain for 4cxt:
    24. Domain for 4i6j:
    25. Domains for 4u2n:
      1. 2169465Domain d4u2na1: 4u2n A:2-105 [261709]
        Other proteins in same PDB: d4u2na3, d4u2nb3
        automated match to d3ga1b_
      2. 2169466Domain d4u2na2: 4u2n A:128-248 [261712]
        Other proteins in same PDB: d4u2na3, d4u2nb3
        automated match to d3ga1b_
      3. 2169467Domain d4u2nb1: 4u2n B:2-105 [261708]
        Other proteins in same PDB: d4u2na3, d4u2nb3
        automated match to d3ga1b_
      4. 2169468Domain d4u2nb2: 4u2n B:128-248 [261711]
        Other proteins in same PDB: d4u2na3, d4u2nb3
        automated match to d3ga1b_
    26. Domains for 4ues:
      1. 2169471Domain d4uesa_: 4ues A: [309715]
        automated match to d5bxba_
        complexed with hg
      2. 2169472Domain d4uesb_: 4ues B: [309716]
        automated match to d5bxba_
        complexed with hg
      3. 2169473Domain d4uesc_: 4ues C: [309717]
        automated match to d5bxba_
        complexed with hg
      4. 2169474Domain d4uesd_: 4ues D: [309718]
        automated match to d5bxba_
        complexed with hg
    27. Domains for 4uij:
      1. 2169476Domain d4uija_: 4uij A: [309719]
        automated match to d5bxba_
        complexed with cl
      2. 2169477Domain d4uijb_: 4uij B: [309720]
        automated match to d5bxba_
        complexed with cl
      3. 2169478Domain d4uijc_: 4uij C: [309721]
        automated match to d5bxba_
        complexed with cl
      4. 2169479Domain d4uijd_: 4uij D: [309722]
        automated match to d5bxba_
        complexed with cl
    28. Domains for 5a6r:
      1. 2169481Domain d5a6ra_: 5a6r A: [310137]
        automated match to d5bxbc_
      2. 2169482Domain d5a6rb_: 5a6r B: [310138]
        automated match to d5bxbc_
      3. 2169483Domain d5a6rc_: 5a6r C: [310139]
        automated match to d5bxbc_
      4. 2169484Domain d5a6rd_: 5a6r D: [310140]
        automated match to d5bxbc_
      5. 2169485Domain d5a6re_: 5a6r E: [310141]
        automated match to d5bxbc_
    29. Domains for 5bxb:
      1. 2169452Domain d5bxba1: 5bxb A:29-132 [276502]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      2. 2169453Domain d5bxbb1: 5bxb B:29-132 [276503]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      3. 2169454Domain d5bxbc1: 5bxb C:29-131 [276505]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      4. 2169455Domain d5bxbd1: 5bxb D:29-132 [276506]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      5. 2169456Domain d5bxbe1: 5bxb E:29-131 [276507]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      6. 2169457Domain d5bxbf1: 5bxb F:29-131 [276508]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      7. 2169458Domain d5bxbg1: 5bxb G:29-131 [276509]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      8. 2169459Domain d5bxbh1: 5bxb H:29-132 [276510]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      9. 2169460Domain d5bxbi1: 5bxb I:29-132 [276511]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
      10. 2169461Domain d5bxbj1: 5bxb J:29-132 [276512]
        Other proteins in same PDB: d5bxba2, d5bxbb2, d5bxbc2, d5bxbd2, d5bxbe2, d5bxbf2, d5bxbg2, d5bxbh2, d5bxbi2, d5bxbj2
        automated match to d3kvta_
    30. Domains for 5bxd:
      1. 2169432Domain d5bxda_: 5bxd A: [276513]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
      2. 2169433Domain d5bxdb1: 5bxd B:29-130 [276514]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
      3. 2169434Domain d5bxdc1: 5bxd C:29-130 [276515]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
      4. 2169435Domain d5bxdd1: 5bxd D:29-132 [276517]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
      5. 2169436Domain d5bxde1: 5bxd E:29-132 [276516]
        Other proteins in same PDB: d5bxdb2, d5bxdc2, d5bxdd2, d5bxde2
        automated match to d3kvta_
    31. Domains for 5bxh:
      1. 2169486Domain d5bxha1: 5bxh A:4-106 [310317]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
      2. 2169487Domain d5bxhb1: 5bxh B:4-106 [310319]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
      3. 2169488Domain d5bxhc1: 5bxh C:4-106 [310321]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
      4. 2169489Domain d5bxhd1: 5bxh D:4-106 [310323]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
      5. 2169490Domain d5bxhe_: 5bxh E: [310325]
        Other proteins in same PDB: d5bxha2, d5bxhb2, d5bxhc2, d5bxhd2
        automated match to d5bxbc_
    32. Domain for 5dad:
    33. Domain for 5daf:
    34. Domains for 5fta:
      1. 2271178Domain d5ftaa_: 5fta A: [314483]
        automated match to d4uesa_
        complexed with hg
      2. 2271179Domain d5ftab_: 5fta B: [314484]
        automated match to d4uesa_
        complexed with hg
      3. 2271217Domain d5ftad_: 5fta D: [314522]
        automated match to d4uesa_
        complexed with hg
      4. 2271267Domain d5ftac_: 5fta C: [314572]
        automated match to d4uesa_
        complexed with hg
    35. Domain for 5git:
    36. Domains for 5ibk:
      1. 2273499Domain d5ibkd1: 5ibk D:1-68 [316800]
        Other proteins in same PDB: d5ibka2, d5ibka3, d5ibkc_, d5ibkd2, d5ibkf_
        automated match to d3wsob1
      2. 2273510Domain d5ibka1: 5ibk A:1-70 [316811]
        Other proteins in same PDB: d5ibka2, d5ibka3, d5ibkc_, d5ibkd2, d5ibkf_
        automated match to d3wsob1
    37. Domain for 5jh5:
    38. Domain for 5k35:
  2. 2169491Mouse (Mus musculus) [TaxId:10090] [188594] (2 PDB entries)
    1. Domains for 2yy9:
      1. 2169493Domain d2yy9a1: 2yy9 A:8-116 [207739]
        Other proteins in same PDB: d2yy9a2, d2yy9b2
        automated match to d3b84a_
      2. 2169494Domain d2yy9b1: 2yy9 B:8-114 [207740]
        Other proteins in same PDB: d2yy9a2, d2yy9b2
        automated match to d3b84a_
    2. Domain for 2z8h:
  3. 2169495Thale cress (Arabidopsis thaliana) [TaxId:3702] [225248] (3 PDB entries)
    1. Domain for 2p1m:
    2. Domain for 2p1p:
    3. Domain for 3c6p:

More info for Protein automated matches from d.42.1.0: automated matches

Timeline for Protein automated matches from d.42.1.0: automated matches: