Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2841375Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
    has additional subdomain(s) that are not in the common domain
  6. 2842682Protein Polymyxin resistance protein ArnA (PrmI) [117419] (1 species)
    evolved new activities: UDP-glucuronic acid decarboxylase, UDP-4-amino-4-deoxy-L-arabinose formyltransferase
  7. 2842683Species Escherichia coli [TaxId:562] [117420] (8 PDB entries)
    Uniprot P77398

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1u9j:
    • 2842687Domain d1u9ja_: 1u9j A: [113243]
      complexed with so4
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 1z73:
    • 2842688Domain d1z73a1: 1z73 A:315-656 [124585]
      complexed with gol, so4; mutant
      has additional subdomain(s) that are not in the common domain
  3. Domain(s) for 1z74:
    • 2842689Domain d1z74a1: 1z74 A:315-656 [124586]
      complexed with so4; mutant
      has additional subdomain(s) that are not in the common domain
  4. Domain(s) for 1z75:
    • 2842686Domain d1z75a1: 1z75 A:315-656 [124587]
      complexed with gol, so4; mutant
      has additional subdomain(s) that are not in the common domain
  5. Domain(s) for 1z7b:
    • 2842685Domain d1z7ba1: 1z7b A:315-656 [124599]
      complexed with so4; mutant
      has additional subdomain(s) that are not in the common domain
  6. Domain(s) for 1z7e:
    1. 2842690Domain d1z7ea2: 1z7e A:314-656 [124607]
      Other proteins in same PDB: d1z7ea1, d1z7ea3, d1z7eb1, d1z7eb3, d1z7ec1, d1z7ec3, d1z7ed1, d1z7ed3, d1z7ee1, d1z7ee3, d1z7ef1, d1z7ef3
      complexed with atp, uga
      has additional subdomain(s) that are not in the common domain
    2. 2842691Domain d1z7eb2: 1z7e B:314-656 [124610]
      Other proteins in same PDB: d1z7ea1, d1z7ea3, d1z7eb1, d1z7eb3, d1z7ec1, d1z7ec3, d1z7ed1, d1z7ed3, d1z7ee1, d1z7ee3, d1z7ef1, d1z7ef3
      automated match to d1z7ea2
      complexed with atp, uga
      has additional subdomain(s) that are not in the common domain
    3. 2842692Domain d1z7ec2: 1z7e C:314-656 [124613]
      Other proteins in same PDB: d1z7ea1, d1z7ea3, d1z7eb1, d1z7eb3, d1z7ec1, d1z7ec3, d1z7ed1, d1z7ed3, d1z7ee1, d1z7ee3, d1z7ef1, d1z7ef3
      automated match to d1z7ea2
      complexed with atp, uga
      has additional subdomain(s) that are not in the common domain
    4. 2842693Domain d1z7ed2: 1z7e D:305-656 [124616]
      Other proteins in same PDB: d1z7ea1, d1z7ea3, d1z7eb1, d1z7eb3, d1z7ec1, d1z7ec3, d1z7ed1, d1z7ed3, d1z7ee1, d1z7ee3, d1z7ef1, d1z7ef3
      automated match to d1z7ea2
      complexed with atp, uga
      has additional subdomain(s) that are not in the common domain
    5. 2842694Domain d1z7ee2: 1z7e E:314-656 [124619]
      Other proteins in same PDB: d1z7ea1, d1z7ea3, d1z7eb1, d1z7eb3, d1z7ec1, d1z7ec3, d1z7ed1, d1z7ed3, d1z7ee1, d1z7ee3, d1z7ef1, d1z7ef3
      automated match to d1z7ea2
      complexed with atp, uga
      has additional subdomain(s) that are not in the common domain
    6. 2842695Domain d1z7ef2: 1z7e F:314-656 [124622]
      Other proteins in same PDB: d1z7ea1, d1z7ea3, d1z7eb1, d1z7eb3, d1z7ec1, d1z7ec3, d1z7ed1, d1z7ed3, d1z7ee1, d1z7ee3, d1z7ef1, d1z7ef3
      automated match to d1z7ea2
      complexed with atp, uga
      has additional subdomain(s) that are not in the common domain
  7. Domain(s) for 2bll:
  8. Domain(s) for 4wkg:
    1. 2842696Domain d4wkga3: 4wkg A:314-656 [262108]
      Other proteins in same PDB: d4wkga1, d4wkga2, d4wkgb1, d4wkgb2, d4wkgc1, d4wkgc2, d4wkgd1, d4wkgd2, d4wkge1, d4wkge2, d4wkgf1, d4wkgf2
      automated match to d1z7ea2
      complexed with act, dtt
      has additional subdomain(s) that are not in the common domain
    2. 2842697Domain d4wkgb3: 4wkg B:314-656 [262113]
      Other proteins in same PDB: d4wkga1, d4wkga2, d4wkgb1, d4wkgb2, d4wkgc1, d4wkgc2, d4wkgd1, d4wkgd2, d4wkge1, d4wkge2, d4wkgf1, d4wkgf2
      automated match to d1z7ea2
      complexed with act, dtt
      has additional subdomain(s) that are not in the common domain
    3. 2842698Domain d4wkgc3: 4wkg C:314-656 [262107]
      Other proteins in same PDB: d4wkga1, d4wkga2, d4wkgb1, d4wkgb2, d4wkgc1, d4wkgc2, d4wkgd1, d4wkgd2, d4wkge1, d4wkge2, d4wkgf1, d4wkgf2
      automated match to d1z7ea2
      complexed with act, dtt
      has additional subdomain(s) that are not in the common domain
    4. 2842699Domain d4wkgf3: 4wkg F:314-656 [262110]
      Other proteins in same PDB: d4wkga1, d4wkga2, d4wkgb1, d4wkgb2, d4wkgc1, d4wkgc2, d4wkgd1, d4wkgd2, d4wkge1, d4wkge2, d4wkgf1, d4wkgf2
      automated match to d1z7ea2
      complexed with act, dtt
      has additional subdomain(s) that are not in the common domain

More info for Species Escherichia coli [TaxId:562] from c.2.1.2 Polymyxin resistance protein ArnA (PrmI)

Timeline for Species Escherichia coli [TaxId:562] from c.2.1.2 Polymyxin resistance protein ArnA (PrmI):