Lineage for Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1983392Family a.4.5.54: Vacuolar sorting protein domain [109692] (3 protein domains)
    duplication: tandem repeat of two "winged-helix" domains
  6. 1983393Protein Vacuolar protein sorting-associated protein VPS25 [109697] (1 species)
  7. 1983394Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [109698] (3 PDB entries)
    Uniprot P47142

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]:

  1. Domain(s) for 1u5t:
    1. 1983407Domain d1u5tc1: 1u5t C:2-125 [107688]
      Other proteins in same PDB: d1u5ta1, d1u5ta2, d1u5tb1, d1u5tb2
    2. 1983408Domain d1u5tc2: 1u5t C:126-199 [107689]
      Other proteins in same PDB: d1u5ta1, d1u5ta2, d1u5tb1, d1u5tb2
    3. 1983409Domain d1u5td1: 1u5t D:2-125 [107690]
      Other proteins in same PDB: d1u5ta1, d1u5ta2, d1u5tb1, d1u5tb2
    4. 1983410Domain d1u5td2: 1u5t D:126-199 [107691]
      Other proteins in same PDB: d1u5ta1, d1u5ta2, d1u5tb1, d1u5tb2
  2. Domain(s) for 1w7p:
    1. 1983403Domain d1w7pb1: 1w7p B:1-125 [114321]
      Other proteins in same PDB: d1w7pa1, d1w7pa2, d1w7pd1, d1w7pd2
    2. 1983404Domain d1w7pb2: 1w7p B:126-199 [114322]
      Other proteins in same PDB: d1w7pa1, d1w7pa2, d1w7pd1, d1w7pd2
    3. 1983405Domain d1w7pc1: 1w7p C:1-125 [114323]
      Other proteins in same PDB: d1w7pa1, d1w7pa2, d1w7pd1, d1w7pd2
    4. 1983406Domain d1w7pc2: 1w7p C:126-199 [114324]
      Other proteins in same PDB: d1w7pa1, d1w7pa2, d1w7pd1, d1w7pd2
  3. Domain(s) for 1xb4:
    1. 1983395Domain d1xb4a1: 1xb4 A:1-125 [121832]
      automated match to d1xb4a1
    2. 1983396Domain d1xb4a2: 1xb4 A:126-201 [121833]
      automated match to d1xb4a2
    3. 1983397Domain d1xb4b1: 1xb4 B:1-125 [121834]
      automated match to d1xb4a1
    4. 1983398Domain d1xb4b2: 1xb4 B:126-202 [121835]
      automated match to d1xb4a2
    5. 1983399Domain d1xb4c1: 1xb4 C:3-125 [121836]
      automated match to d1xb4a1
    6. 1983400Domain d1xb4c2: 1xb4 C:126-201 [121837]
      automated match to d1xb4a2
    7. 1983401Domain d1xb4d1: 1xb4 D:2-125 [121838]
    8. 1983402Domain d1xb4d2: 1xb4 D:126-201 [121839]
      automated match to d1xb4d2

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.4.5.54 Vacuolar protein sorting-associated protein VPS25

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from a.4.5.54 Vacuolar protein sorting-associated protein VPS25: