Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins) |
Protein Viral RNA polymerase [56695] (17 species) |
Species Hepatitis C virus [TaxId:11103] [56697] (72 PDB entries) |
Domain d1c2pa_: 1c2p A: [43117] |
Domain d1c2pb_: 1c2p B: [43118] |
Domain d1csja_: 1csj A: [43120] |
Domain d1csjb_: 1csj B: [43121] |
Domain d1gx5a_: 1gx5 A: [70682] protein/RNA complex; complexed with gtp, mn |
Domain d1gx6a_: 1gx6 A: [70683] protein/RNA complex; complexed with mn, utp |
Domain d1nb4a_: 1nb4 A: [85509] |
Domain d1nb4b_: 1nb4 B: [85510] |
Domain d1nb6a_: 1nb6 A: [85511] protein/RNA complex; complexed with mn, utp |
Domain d1nb6b_: 1nb6 B: [85512] protein/RNA complex; complexed with mn, utp |
Domain d1nb7a_: 1nb7 A: [85513] protein/RNA complex; complexed with mn |
Domain d1nb7b_: 1nb7 B: [85514] protein/RNA complex; complexed with mn |
Domain d1nhua_: 1nhu A: [85723] protein/RNA complex; complexed with 153 |
Domain d1nhub_: 1nhu B: [85724] protein/RNA complex; complexed with 153 |
Domain d1nhva_: 1nhv A: [85725] protein/RNA complex; complexed with 154 |
Domain d1nhvb_: 1nhv B: [85726] protein/RNA complex; complexed with 154 |
Domain d1os5a_: 1os5 A: [93475] protein/RNA complex; complexed with nh1 |
Domain d1quva_: 1quv A: [43119] |
Domain d2brka_: 2brk A: [129001] automated match to d1gx5a_ protein/RNA complex; complexed with cmf, mn |
Domain d2brla_: 2brl A: [203633] automated match to d1gx5a_ protein/RNA complex; complexed with mn, poo |
Domain d2fvca_: 2fvc A: [164476] automated match to d1nb4a_ complexed with 888 |
Domain d2fvcb_: 2fvc B: [164477] automated match to d1nb4a_ complexed with 888 |
Domain d2haia_: 2hai A: [165036] automated match to d1nb4a_ protein/RNA complex; complexed with pfi |
Domain d2qe2a_: 2qe2 A: [167555] automated match to d1nb4a_ complexed with 452 |
Domain d2qe2b_: 2qe2 B: [167556] automated match to d1nb4a_ complexed with 452 |
Domain d2qe5a_: 2qe5 A: [167559] automated match to d1nb4a_ complexed with 617 |
Domain d2qe5b_: 2qe5 B: [167560] automated match to d1nb4a_ complexed with 617 |
Domain d2qe5c_: 2qe5 C: [167561] automated match to d1nb4a_ complexed with 617 |
Domain d2qe5d_: 2qe5 D: [167562] automated match to d1nb4a_ complexed with 617 |
Domain d2whoa_: 2who A: [206824] automated match to d1gx5a_ protein/RNA complex; complexed with mn, vgi |
Domain d2whob_: 2who B: [206825] automated match to d1gx5a_ protein/RNA complex; complexed with mn, vgi |
Domain d2wrma_: 2wrm A: [206983] automated match to d1gx5a_ complexed with qq3 |
Domain d2zkua_: 2zku A: [171292] automated match to d1nb4a_ complexed with acy, gol |
Domain d2zkub_: 2zku B: [171293] automated match to d1nb4a_ complexed with acy, gol |
Domain d2zkuc_: 2zku C: [171294] automated match to d1nb4a_ complexed with acy, gol |
Domain d2zkud_: 2zku D: [171295] automated match to d1nb4a_ complexed with acy, gol |
Domain d3ciza_: 3ciz A: [173264] automated match to d1nb4a_ protein/RNA complex; complexed with sx1, zn |
Domain d3cizb_: 3ciz B: [173265] automated match to d1nb4a_ protein/RNA complex; complexed with sx1, zn |
Domain d3cj0a_: 3cj0 A: [173266] automated match to d1nb4a_ protein/RNA complex; complexed with sx2 |
Domain d3cj0b_: 3cj0 B: [173267] automated match to d1nb4a_ protein/RNA complex; complexed with sx2 |
Domain d3cj2a_: 3cj2 A: [173268] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx3 |
Domain d3cj2b_: 3cj2 B: [173269] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx3 |
Domain d3cj3a_: 3cj3 A: [173270] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx4 |
Domain d3cj3b_: 3cj3 B: [173271] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx4 |
Domain d3cj4a_: 3cj4 A: [173272] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx5 |
Domain d3cj4b_: 3cj4 B: [173273] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx5 |
Domain d3cj5a_: 3cj5 A: [173274] automated match to d1nb4a_ protein/RNA complex; complexed with sx6 |
Domain d3cj5b_: 3cj5 B: [173275] automated match to d1nb4a_ protein/RNA complex; complexed with sx6 |
Domain d3frza_: 3frz A: [176007] automated match to d1nb4a_ protein/RNA complex; complexed with ag0, ag6, bme |
Domain d3h59a_: 3h59 A: [177195] automated match to d1nb4a_ complexed with h59 |
Domain d3h59b_: 3h59 B: [177196] automated match to d1nb4a_ complexed with h59 |
Domain d3h5sa_: 3h5s A: [177201] automated match to d1nb4a_ complexed with h5s |
Domain d3h5sb_: 3h5s B: [177202] automated match to d1nb4a_ complexed with h5s |
Domain d3h5ua_: 3h5u A: [177203] automated match to d1nb4a_ complexed with h5u |
Domain d3h5ub_: 3h5u B: [177204] automated match to d1nb4a_ complexed with h5u |
Domain d3hkya_: 3hky A: [177660] automated match to d1nb4a_ complexed with cl, ix6, so4 |
Domain d3hkyb_: 3hky B: [177661] automated match to d1nb4a_ complexed with cl, ix6, so4 |
Domain d3lkha_: 3lkh A: [180342] automated match to d1nb4a_ complexed with lt6 |
Domain d3lkhb_: 3lkh B: [180343] automated match to d1nb4a_ complexed with lt6 |
Domain d3mf5a_: 3mf5 A: [181043] automated match to d1c2pb_ complexed with gol, hjz |
Domain d3mf5b_: 3mf5 B: [181044] automated match to d1c2pb_ complexed with gol, hjz |
Domain d3mwva_: 3mwv A: [181653] automated match to d1nb4a_ |
Domain d3mwvb_: 3mwv B: [181654] automated match to d1nb4a_ |
Domain d3mwwa_: 3mww A: [181655] automated match to d1nb4a_ complexed with biw, so4 |
Domain d3mwwb_: 3mww B: [181656] automated match to d1nb4a_ complexed with biw, so4 |
Domain d3q0za_: 3q0z A: [184133] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, so4 |
Domain d3q0zb_: 3q0z B: [184134] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, so4 |
Domain d3qgda_: 3qgd A: [184371] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 26s, so4 |
Domain d3qgdb_: 3qgd B: [184372] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 26s, so4 |
Domain d3qgea_: 3qge A: [248881] automated match to d3q0za_ protein/RNA complex; complexed with 23e, 26f, so4 |
Domain d3qgeb_: 3qge B: [248882] automated match to d3q0za_ protein/RNA complex; complexed with 23e, 26f, so4 |
Domain d3qgfa_: 3qgf A: [184373] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 46f, so4 |
Domain d3qgfb_: 3qgf B: [184374] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 46f, so4 |
Domain d3skab_: 3ska B: [216430] Other proteins in same PDB: d3skaa_ automated match to d3lkha_ protein/RNA complex; complexed with 053, po4 |
Domain d3skha_: 3skh A: [216431] automated match to d3lkha_ protein/RNA complex; complexed with 058 |
Domain d3skhb_: 3skh B: [216432] automated match to d3lkha_ protein/RNA complex; complexed with 058 |
Domain d3tyqa_: 3tyq A: [186013] automated match to d1nb4a_ protein/RNA complex; complexed with hi4, po4 |
Domain d3tyqb_: 3tyq B: [186014] automated match to d1nb4a_ protein/RNA complex; complexed with hi4, po4 |
Domain d3tyva_: 3tyv A: [186015] automated match to d1nb4a_ protein/RNA complex; complexed with hi3, po4 |
Domain d3tyvb_: 3tyv B: [186016] automated match to d1nb4a_ protein/RNA complex; complexed with hi3, po4 |
Domain d3u4oa_: 3u4o A: [186076] automated match to d1nb4a_ complexed with 08e, po4 |
Domain d3u4ob_: 3u4o B: [186077] automated match to d1nb4a_ complexed with 08e, po4 |
Domain d3u4ra_: 3u4r A: [186078] automated match to d1nb4a_ complexed with 08f |
Domain d3u4rb_: 3u4r B: [186079] automated match to d1nb4a_ complexed with 08f |
Domain d4drua_: 4dru A: [195587] automated match to d1nb4a_ complexed with 0ln, gol, so4 |
Domain d4drub_: 4dru B: [195588] automated match to d1nb4a_ complexed with 0ln, gol, so4 |
Domain d4eawa_: 4eaw A: [196703] automated match to d1nb4a_ complexed with 0nq, edo, peg, so4 |
Domain d4eawb_: 4eaw B: [201821] automated match to d4eawa_ complexed with 0nq, edo, peg, so4 |
Domain d4gmca_: 4gmc A: [221997] automated match to d3mwva_ complexed with 1bi, so4 |
Domain d4gmcb_: 4gmc B: [221998] automated match to d3mwva_ complexed with 1bi, so4 |
Domain d4ih5a_: 4ih5 A: [223170] automated match to d3mf5a_ complexed with 12r |
Domain d4ih5b_: 4ih5 B: [223171] automated match to d3mf5a_ complexed with 12r |
Domain d4ih6a_: 4ih6 A: [223172] automated match to d3mf5a_ complexed with 1ep |
Domain d4ih6b_: 4ih6 B: [223173] automated match to d3mf5a_ complexed with 1ep |
Domain d4ih7a_: 4ih7 A: [223174] automated match to d3mf5a_ complexed with 1er, zn |
Domain d4ih7b_: 4ih7 B: [223175] automated match to d3mf5a_ complexed with 1er, zn |
Domain d4iz0b_: 4iz0 B: [202683] automated match to d3mwva_ complexed with 2bi |
Domain d4j04a_: 4j04 A: [223496] automated match to d3mwva_ protein/RNA complex; complexed with 1jf, mn |
Domain d4j04b_: 4j04 B: [223497] automated match to d3mwva_ protein/RNA complex; complexed with 1jf, mn |
Domain d4j06a_: 4j06 A: [223498] automated match to d3mwva_ protein/RNA complex; complexed with 1jg |
Domain d4j06b_: 4j06 B: [223499] automated match to d3mwva_ protein/RNA complex; complexed with 1jg |
Domain d4j08a_: 4j08 A: [223500] automated match to d3mwva_ protein/RNA complex; complexed with 1jh |
Domain d4j08b_: 4j08 B: [223501] automated match to d3mwva_ protein/RNA complex; complexed with 1jh |
Domain d4j0aa_: 4j0a A: [223502] automated match to d3mwva_ protein/RNA complex; complexed with 1jl |
Domain d4j0ab_: 4j0a B: [223503] automated match to d3mwva_ protein/RNA complex; complexed with 1jl |
Domain d4jjsa_: 4jjs A: [223845] automated match to d3mwva_ complexed with 1m9, mg |
Domain d4jjsb_: 4jjs B: [223846] automated match to d3mwva_ complexed with 1m9, mg |
Domain d4jjua_: 4jju A: [202748] automated match to d3mwva_ complexed with 1mb, gol, mg |
Domain d4jtya_: 4jty A: [224025] automated match to d3mwva_ protein/RNA complex; complexed with 1nv, gol, mg |
Domain d4jtyb_: 4jty B: [224026] automated match to d3mwva_ protein/RNA complex; complexed with 1nv, gol, mg |
Domain d4jtza_: 4jtz A: [224027] automated match to d3mwva_ protein/RNA complex; complexed with 1nw, gol, mg |
Domain d4jtzb_: 4jtz B: [224028] automated match to d3mwva_ protein/RNA complex; complexed with 1nw, gol, mg |
Domain d4ju1a_: 4ju1 A: [224029] automated match to d3mwva_ protein/RNA complex; complexed with 1nz, gol, mg |
Domain d4ju1b_: 4ju1 B: [224030] automated match to d3mwva_ protein/RNA complex; complexed with 1nz, gol, mg |
Domain d4ju2a_: 4ju2 A: [224031] automated match to d3mwva_ protein/RNA complex; complexed with 1o0, gol, mg |
Domain d4ju2b_: 4ju2 B: [224032] automated match to d3mwva_ protein/RNA complex; complexed with 1o0, gol, mg |
Domain d4ju3a_: 4ju3 A: [229256] automated match to d3mwva_ protein/RNA complex; complexed with 1o1, mg |
Domain d4ju3b_: 4ju3 B: [229260] automated match to d3mwva_ protein/RNA complex; complexed with 1o1, mg |
Domain d4ju4a_: 4ju4 A: [229261] automated match to d3mwva_ protein/RNA complex; complexed with 1o3, mg |
Domain d4ju4b_: 4ju4 B: [229262] automated match to d3mwva_ protein/RNA complex; complexed with 1o3, mg |
Domain d4ju6a_: 4ju6 A: [229258] automated match to d3mwva_ protein/RNA complex; complexed with 1o6, mg |
Domain d4ju6b_: 4ju6 B: [229257] automated match to d3mwva_ protein/RNA complex; complexed with 1o6, mg |
Domain d4ju7a_: 4ju7 A: [229255] automated match to d3mwva_ protein/RNA complex; complexed with 1o6, mg |
Domain d4ju7b_: 4ju7 B: [229259] automated match to d3mwva_ protein/RNA complex; complexed with 1o6, mg |
Domain d4jvqa_: 4jvq A: [236552] automated match to d3mwva_ protein/RNA complex; complexed with 1ml, gol, mg |
Domain d4jvqb_: 4jvq B: [236553] automated match to d3mwva_ protein/RNA complex; complexed with 1ml, gol, mg |
Domain d4mk7a_: 4mk7 A: [228253] automated match to d3mf5a_ complexed with 28o, dms, mg |
Domain d4mk7b_: 4mk7 B: [228252] automated match to d3mf5a_ complexed with 28o, dms, mg |
Domain d4mk8a_: 4mk8 A: [228259] automated match to d3mf5a_ complexed with 28q, dms, gol |
Domain d4mk8b_: 4mk8 B: [228261] automated match to d3mf5a_ complexed with 28q, dms, gol |
Domain d4mk9a_: 4mk9 A: [228258] automated match to d3mf5a_ complexed with 28r, gol |
Domain d4mk9b_: 4mk9 B: [228260] automated match to d3mf5a_ complexed with 28r, gol |
Domain d4mkaa_: 4mka A: [228256] automated match to d3mf5a_ complexed with 2ay, dms, gol |
Domain d4mkab_: 4mka B: [228257] automated match to d3mf5a_ complexed with 2ay, dms, gol |
Domain d4mkba_: 4mkb A: [228254] automated match to d3mf5a_ complexed with 28v |
Domain d4mkbb_: 4mkb B: [228255] automated match to d3mf5a_ complexed with 28v |
Timeline for Species Hepatitis C virus [TaxId:11103] from e.8.1.4 Viral RNA polymerase: