Lineage for Species: Hepatitis C virus [TaxId: 11103]

  1. Root: SCOPe 2.05
  2. 1949014Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)
  3. 1951566Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 1951567Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 1952391Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)
  6. 1952399Protein Viral RNA polymerase [56695] (17 species)
  7. 1952480Species Hepatitis C virus [TaxId:11103] [56697] (72 PDB entries)

PDB entries in Species: Hepatitis C virus [TaxId: 11103]:

  1. Domain(s) for 1c2p:
    1. 1952522Domain d1c2pa_: 1c2p A: [43117]
    2. 1952523Domain d1c2pb_: 1c2p B: [43118]
  2. Domain(s) for 1csj:
    1. 1952599Domain d1csja_: 1csj A: [43120]
    2. 1952600Domain d1csjb_: 1csj B: [43121]
  3. Domain(s) for 1gx5:
  4. Domain(s) for 1gx6:
  5. Domain(s) for 1nb4:
    1. 1952536Domain d1nb4a_: 1nb4 A: [85509]
    2. 1952537Domain d1nb4b_: 1nb4 B: [85510]
  6. Domain(s) for 1nb6:
    1. 1952572Domain d1nb6a_: 1nb6 A: [85511]
      protein/RNA complex; complexed with mn, utp
    2. 1952573Domain d1nb6b_: 1nb6 B: [85512]
      protein/RNA complex; complexed with mn, utp
  7. Domain(s) for 1nb7:
    1. 1952609Domain d1nb7a_: 1nb7 A: [85513]
      protein/RNA complex; complexed with mn
    2. 1952610Domain d1nb7b_: 1nb7 B: [85514]
      protein/RNA complex; complexed with mn
  8. Domain(s) for 1nhu:
    1. 1952532Domain d1nhua_: 1nhu A: [85723]
      protein/RNA complex; complexed with 153
    2. 1952533Domain d1nhub_: 1nhu B: [85724]
      protein/RNA complex; complexed with 153
  9. Domain(s) for 1nhv:
    1. 1952605Domain d1nhva_: 1nhv A: [85725]
      protein/RNA complex; complexed with 154
    2. 1952606Domain d1nhvb_: 1nhv B: [85726]
      protein/RNA complex; complexed with 154
  10. Domain(s) for 1os5:
  11. Domain(s) for 1quv:
  12. Domain(s) for 2brk:
  13. Domain(s) for 2brl:
  14. Domain(s) for 2fvc:
    1. 1952524Domain d2fvca_: 2fvc A: [164476]
      automated match to d1nb4a_
      complexed with 888
    2. 1952525Domain d2fvcb_: 2fvc B: [164477]
      automated match to d1nb4a_
      complexed with 888
  15. Domain(s) for 2hai:
  16. Domain(s) for 2qe2:
    1. 1952615Domain d2qe2a_: 2qe2 A: [167555]
      automated match to d1nb4a_
      complexed with 452
    2. 1952616Domain d2qe2b_: 2qe2 B: [167556]
      automated match to d1nb4a_
      complexed with 452
  17. Domain(s) for 2qe5:
    1. 1952584Domain d2qe5a_: 2qe5 A: [167559]
      automated match to d1nb4a_
      complexed with 617
    2. 1952585Domain d2qe5b_: 2qe5 B: [167560]
      automated match to d1nb4a_
      complexed with 617
    3. 1952586Domain d2qe5c_: 2qe5 C: [167561]
      automated match to d1nb4a_
      complexed with 617
    4. 1952587Domain d2qe5d_: 2qe5 D: [167562]
      automated match to d1nb4a_
      complexed with 617
  18. Domain(s) for 2who:
    1. 1952542Domain d2whoa_: 2who A: [206824]
      automated match to d1gx5a_
      protein/RNA complex; complexed with mn, vgi
    2. 1952543Domain d2whob_: 2who B: [206825]
      automated match to d1gx5a_
      protein/RNA complex; complexed with mn, vgi
  19. Domain(s) for 2wrm:
  20. Domain(s) for 2zku:
    1. 1952511Domain d2zkua_: 2zku A: [171292]
      automated match to d1nb4a_
      complexed with acy, gol
    2. 1952512Domain d2zkub_: 2zku B: [171293]
      automated match to d1nb4a_
      complexed with acy, gol
    3. 1952513Domain d2zkuc_: 2zku C: [171294]
      automated match to d1nb4a_
      complexed with acy, gol
    4. 1952514Domain d2zkud_: 2zku D: [171295]
      automated match to d1nb4a_
      complexed with acy, gol
  21. Domain(s) for 3ciz:
    1. 1952495Domain d3ciza_: 3ciz A: [173264]
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx1, zn
    2. 1952496Domain d3cizb_: 3ciz B: [173265]
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx1, zn
  22. Domain(s) for 3cj0:
    1. 1952501Domain d3cj0a_: 3cj0 A: [173266]
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx2
    2. 1952502Domain d3cj0b_: 3cj0 B: [173267]
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx2
  23. Domain(s) for 3cj2:
    1. 1952491Domain d3cj2a_: 3cj2 A: [173268]
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx3
    2. 1952492Domain d3cj2b_: 3cj2 B: [173269]
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx3
  24. Domain(s) for 3cj3:
    1. 1952509Domain d3cj3a_: 3cj3 A: [173270]
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx4
    2. 1952510Domain d3cj3b_: 3cj3 B: [173271]
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx4
  25. Domain(s) for 3cj4:
    1. 1952546Domain d3cj4a_: 3cj4 A: [173272]
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx5
    2. 1952547Domain d3cj4b_: 3cj4 B: [173273]
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx5
  26. Domain(s) for 3cj5:
    1. 1952507Domain d3cj5a_: 3cj5 A: [173274]
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx6
    2. 1952508Domain d3cj5b_: 3cj5 B: [173275]
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx6
  27. Domain(s) for 3frz:
  28. Domain(s) for 3h59:
    1. 1952538Domain d3h59a_: 3h59 A: [177195]
      automated match to d1nb4a_
      complexed with h59
    2. 1952539Domain d3h59b_: 3h59 B: [177196]
      automated match to d1nb4a_
      complexed with h59
  29. Domain(s) for 3h5s:
    1. 1952528Domain d3h5sa_: 3h5s A: [177201]
      automated match to d1nb4a_
      complexed with h5s
    2. 1952529Domain d3h5sb_: 3h5s B: [177202]
      automated match to d1nb4a_
      complexed with h5s
  30. Domain(s) for 3h5u:
    1. 1952518Domain d3h5ua_: 3h5u A: [177203]
      automated match to d1nb4a_
      complexed with h5u
    2. 1952519Domain d3h5ub_: 3h5u B: [177204]
      automated match to d1nb4a_
      complexed with h5u
  31. Domain(s) for 3hky:
    1. 1952493Domain d3hkya_: 3hky A: [177660]
      automated match to d1nb4a_
      complexed with cl, ix6, so4
    2. 1952494Domain d3hkyb_: 3hky B: [177661]
      automated match to d1nb4a_
      complexed with cl, ix6, so4
  32. Domain(s) for 3lkh:
    1. 1952534Domain d3lkha_: 3lkh A: [180342]
      automated match to d1nb4a_
      complexed with lt6
    2. 1952535Domain d3lkhb_: 3lkh B: [180343]
      automated match to d1nb4a_
      complexed with lt6
  33. Domain(s) for 3mf5:
    1. 1952505Domain d3mf5a_: 3mf5 A: [181043]
      automated match to d1c2pb_
      complexed with gol, hjz
    2. 1952506Domain d3mf5b_: 3mf5 B: [181044]
      automated match to d1c2pb_
      complexed with gol, hjz
  34. Domain(s) for 3mwv:
    1. 1952550Domain d3mwva_: 3mwv A: [181653]
      automated match to d1nb4a_
    2. 1952551Domain d3mwvb_: 3mwv B: [181654]
      automated match to d1nb4a_
  35. Domain(s) for 3mww:
    1. 1952595Domain d3mwwa_: 3mww A: [181655]
      automated match to d1nb4a_
      complexed with biw, so4
    2. 1952596Domain d3mwwb_: 3mww B: [181656]
      automated match to d1nb4a_
      complexed with biw, so4
  36. Domain(s) for 3q0z:
    1. 1952556Domain d3q0za_: 3q0z A: [184133]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, so4
    2. 1952557Domain d3q0zb_: 3q0z B: [184134]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, so4
  37. Domain(s) for 3qgd:
    1. 1952576Domain d3qgda_: 3qgd A: [184371]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, 26s, so4
    2. 1952577Domain d3qgdb_: 3qgd B: [184372]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, 26s, so4
  38. Domain(s) for 3qge:
    1. 1952603Domain d3qgea_: 3qge A: [248881]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 26f, so4
    2. 1952604Domain d3qgeb_: 3qge B: [248882]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 26f, so4
  39. Domain(s) for 3qgf:
    1. 1952574Domain d3qgfa_: 3qgf A: [184373]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, 46f, so4
    2. 1952575Domain d3qgfb_: 3qgf B: [184374]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, 46f, so4
  40. Domain(s) for 3ska:
  41. Domain(s) for 3skh:
    1. 1952570Domain d3skha_: 3skh A: [216431]
      automated match to d3lkha_
      protein/RNA complex; complexed with 058
    2. 1952571Domain d3skhb_: 3skh B: [216432]
      automated match to d3lkha_
      protein/RNA complex; complexed with 058
  42. Domain(s) for 3tyq:
    1. 1952481Domain d3tyqa_: 3tyq A: [186013]
      automated match to d1nb4a_
      protein/RNA complex; complexed with hi4, po4
    2. 1952482Domain d3tyqb_: 3tyq B: [186014]
      automated match to d1nb4a_
      protein/RNA complex; complexed with hi4, po4
  43. Domain(s) for 3tyv:
    1. 1952483Domain d3tyva_: 3tyv A: [186015]
      automated match to d1nb4a_
      protein/RNA complex; complexed with hi3, po4
    2. 1952484Domain d3tyvb_: 3tyv B: [186016]
      automated match to d1nb4a_
      protein/RNA complex; complexed with hi3, po4
  44. Domain(s) for 3u4o:
    1. 1952487Domain d3u4oa_: 3u4o A: [186076]
      automated match to d1nb4a_
      complexed with 08e, po4
    2. 1952488Domain d3u4ob_: 3u4o B: [186077]
      automated match to d1nb4a_
      complexed with 08e, po4
  45. Domain(s) for 3u4r:
    1. 1952530Domain d3u4ra_: 3u4r A: [186078]
      automated match to d1nb4a_
      complexed with 08f
    2. 1952531Domain d3u4rb_: 3u4r B: [186079]
      automated match to d1nb4a_
      complexed with 08f
  46. Domain(s) for 4dru:
    1. 1952526Domain d4drua_: 4dru A: [195587]
      automated match to d1nb4a_
      complexed with 0ln, gol, so4
    2. 1952527Domain d4drub_: 4dru B: [195588]
      automated match to d1nb4a_
      complexed with 0ln, gol, so4
  47. Domain(s) for 4eaw:
    1. 1952503Domain d4eawa_: 4eaw A: [196703]
      automated match to d1nb4a_
      complexed with 0nq, edo, peg, so4
    2. 1952504Domain d4eawb_: 4eaw B: [201821]
      automated match to d4eawa_
      complexed with 0nq, edo, peg, so4
  48. Domain(s) for 4gmc:
    1. 1952588Domain d4gmca_: 4gmc A: [221997]
      automated match to d3mwva_
      complexed with 1bi, so4
    2. 1952589Domain d4gmcb_: 4gmc B: [221998]
      automated match to d3mwva_
      complexed with 1bi, so4
  49. Domain(s) for 4ih5:
    1. 1952499Domain d4ih5a_: 4ih5 A: [223170]
      automated match to d3mf5a_
      complexed with 12r
    2. 1952500Domain d4ih5b_: 4ih5 B: [223171]
      automated match to d3mf5a_
      complexed with 12r
  50. Domain(s) for 4ih6:
    1. 1952548Domain d4ih6a_: 4ih6 A: [223172]
      automated match to d3mf5a_
      complexed with 1ep
    2. 1952549Domain d4ih6b_: 4ih6 B: [223173]
      automated match to d3mf5a_
      complexed with 1ep
  51. Domain(s) for 4ih7:
    1. 1952564Domain d4ih7a_: 4ih7 A: [223174]
      automated match to d3mf5a_
      complexed with 1er, zn
    2. 1952565Domain d4ih7b_: 4ih7 B: [223175]
      automated match to d3mf5a_
      complexed with 1er, zn
  52. Domain(s) for 4iz0:
  53. Domain(s) for 4j04:
    1. 1952515Domain d4j04a_: 4j04 A: [223496]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jf, mn
    2. 1952516Domain d4j04b_: 4j04 B: [223497]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jf, mn
  54. Domain(s) for 4j06:
    1. 1952520Domain d4j06a_: 4j06 A: [223498]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jg
    2. 1952521Domain d4j06b_: 4j06 B: [223499]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jg
  55. Domain(s) for 4j08:
    1. 1952544Domain d4j08a_: 4j08 A: [223500]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jh
    2. 1952545Domain d4j08b_: 4j08 B: [223501]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jh
  56. Domain(s) for 4j0a:
    1. 1952580Domain d4j0aa_: 4j0a A: [223502]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jl
    2. 1952581Domain d4j0ab_: 4j0a B: [223503]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jl
  57. Domain(s) for 4jjs:
    1. 1952560Domain d4jjsa_: 4jjs A: [223845]
      automated match to d3mwva_
      complexed with 1m9, mg
    2. 1952561Domain d4jjsb_: 4jjs B: [223846]
      automated match to d3mwva_
      complexed with 1m9, mg
  58. Domain(s) for 4jju:
  59. Domain(s) for 4jty:
    1. 1952597Domain d4jtya_: 4jty A: [224025]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nv, gol, mg
    2. 1952598Domain d4jtyb_: 4jty B: [224026]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nv, gol, mg
  60. Domain(s) for 4jtz:
    1. 1952613Domain d4jtza_: 4jtz A: [224027]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nw, gol, mg
    2. 1952614Domain d4jtzb_: 4jtz B: [224028]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nw, gol, mg
  61. Domain(s) for 4ju1:
    1. 1952607Domain d4ju1a_: 4ju1 A: [224029]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nz, gol, mg
    2. 1952608Domain d4ju1b_: 4ju1 B: [224030]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nz, gol, mg
  62. Domain(s) for 4ju2:
    1. 1952601Domain d4ju2a_: 4ju2 A: [224031]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o0, gol, mg
    2. 1952602Domain d4ju2b_: 4ju2 B: [224032]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o0, gol, mg
  63. Domain(s) for 4ju3:
    1. 1952568Domain d4ju3a_: 4ju3 A: [229256]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o1, mg
    2. 1952569Domain d4ju3b_: 4ju3 B: [229260]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o1, mg
  64. Domain(s) for 4ju4:
    1. 1952590Domain d4ju4a_: 4ju4 A: [229261]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o3, mg
    2. 1952591Domain d4ju4b_: 4ju4 B: [229262]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o3, mg
  65. Domain(s) for 4ju6:
    1. 1952582Domain d4ju6a_: 4ju6 A: [229258]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o6, mg
    2. 1952583Domain d4ju6b_: 4ju6 B: [229257]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o6, mg
  66. Domain(s) for 4ju7:
    1. 1952592Domain d4ju7a_: 4ju7 A: [229255]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o6, mg
    2. 1952593Domain d4ju7b_: 4ju7 B: [229259]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o6, mg
  67. Domain(s) for 4jvq:
    1. 1952578Domain d4jvqa_: 4jvq A: [236552]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1ml, gol, mg
    2. 1952579Domain d4jvqb_: 4jvq B: [236553]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1ml, gol, mg
  68. Domain(s) for 4mk7:
    1. 1952611Domain d4mk7a_: 4mk7 A: [228253]
      automated match to d3mf5a_
      complexed with 28o, dms, mg
    2. 1952612Domain d4mk7b_: 4mk7 B: [228252]
      automated match to d3mf5a_
      complexed with 28o, dms, mg
  69. Domain(s) for 4mk8:
    1. 1952566Domain d4mk8a_: 4mk8 A: [228259]
      automated match to d3mf5a_
      complexed with 28q, dms, gol
    2. 1952567Domain d4mk8b_: 4mk8 B: [228261]
      automated match to d3mf5a_
      complexed with 28q, dms, gol
  70. Domain(s) for 4mk9:
    1. 1952558Domain d4mk9a_: 4mk9 A: [228258]
      automated match to d3mf5a_
      complexed with 28r, gol
    2. 1952559Domain d4mk9b_: 4mk9 B: [228260]
      automated match to d3mf5a_
      complexed with 28r, gol
  71. Domain(s) for 4mka:
    1. 1952554Domain d4mkaa_: 4mka A: [228256]
      automated match to d3mf5a_
      complexed with 2ay, dms, gol
    2. 1952555Domain d4mkab_: 4mka B: [228257]
      automated match to d3mf5a_
      complexed with 2ay, dms, gol
  72. Domain(s) for 4mkb:
    1. 1952540Domain d4mkba_: 4mkb A: [228254]
      automated match to d3mf5a_
      complexed with 28v
    2. 1952541Domain d4mkbb_: 4mkb B: [228255]
      automated match to d3mf5a_
      complexed with 28v

More info for Species Hepatitis C virus [TaxId:11103] from e.8.1.4 Viral RNA polymerase

Timeline for Species Hepatitis C virus [TaxId:11103] from e.8.1.4 Viral RNA polymerase: