Lineage for Species: Hepatitis C virus [TaxId: 11103]

  1. Root: SCOPe 2.07
  2. 2568173Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2571153Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2571154Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2572036Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)
  6. 2572044Protein Viral RNA polymerase [56695] (17 species)
  7. 2572094Species Hepatitis C virus [TaxId:11103] [56697] (72 PDB entries)

PDB entries in Species: Hepatitis C virus [TaxId: 11103]:

  1. Domain(s) for 1c2p:
    1. 2572166Domain d1c2pa1: 1c2p A:3-563 [43117]
      Other proteins in same PDB: d1c2pa2, d1c2pb2
    2. 2572167Domain d1c2pb1: 1c2p B:3-566 [43118]
      Other proteins in same PDB: d1c2pa2, d1c2pb2
  2. Domain(s) for 1csj:
    1. 2572211Domain d1csja_: 1csj A: [43120]
    2. 2572212Domain d1csjb_: 1csj B: [43121]
  3. Domain(s) for 1gx5:
  4. Domain(s) for 1gx6:
  5. Domain(s) for 1nb4:
    1. 2572137Domain d1nb4a_: 1nb4 A: [85509]
    2. 2572138Domain d1nb4b_: 1nb4 B: [85510]
  6. Domain(s) for 1nb6:
    1. 2572180Domain d1nb6a_: 1nb6 A: [85511]
      protein/RNA complex; complexed with mn, utp
    2. 2572181Domain d1nb6b_: 1nb6 B: [85512]
      protein/RNA complex; complexed with mn, utp
  7. Domain(s) for 1nb7:
    1. 2572219Domain d1nb7a_: 1nb7 A: [85513]
      protein/RNA complex; complexed with mn
    2. 2572220Domain d1nb7b_: 1nb7 B: [85514]
      protein/RNA complex; complexed with mn
  8. Domain(s) for 1nhu:
    1. 2572182Domain d1nhua_: 1nhu A: [85723]
      protein/RNA complex; complexed with 153
    2. 2572183Domain d1nhub_: 1nhu B: [85724]
      protein/RNA complex; complexed with 153
  9. Domain(s) for 1nhv:
    1. 2572229Domain d1nhva_: 1nhv A: [85725]
      protein/RNA complex; complexed with 154
    2. 2572230Domain d1nhvb_: 1nhv B: [85726]
      protein/RNA complex; complexed with 154
  10. Domain(s) for 1os5:
  11. Domain(s) for 1quv:
  12. Domain(s) for 2brk:
  13. Domain(s) for 2brl:
  14. Domain(s) for 2fvc:
    1. 2572176Domain d2fvca_: 2fvc A: [164476]
      automated match to d1nb4a_
      complexed with 888
    2. 2572177Domain d2fvcb_: 2fvc B: [164477]
      automated match to d1nb4a_
      complexed with 888
  15. Domain(s) for 2hai:
  16. Domain(s) for 2qe2:
    1. 2572225Domain d2qe2a_: 2qe2 A: [167555]
      automated match to d1nb4a_
      complexed with 452
    2. 2572226Domain d2qe2b_: 2qe2 B: [167556]
      automated match to d1nb4a_
      complexed with 452
  17. Domain(s) for 2qe5:
    1. 2572194Domain d2qe5a_: 2qe5 A: [167559]
      automated match to d1nb4a_
      complexed with 617
    2. 2572195Domain d2qe5b_: 2qe5 B: [167560]
      automated match to d1nb4a_
      complexed with 617
    3. 2572196Domain d2qe5c_: 2qe5 C: [167561]
      automated match to d1nb4a_
      complexed with 617
    4. 2572197Domain d2qe5d_: 2qe5 D: [167562]
      automated match to d1nb4a_
      complexed with 617
  18. Domain(s) for 2who:
    1. 2572143Domain d2whoa_: 2who A: [206824]
      automated match to d1gx5a_
      protein/RNA complex; complexed with mn, vgi
    2. 2572144Domain d2whob_: 2who B: [206825]
      automated match to d1gx5a_
      protein/RNA complex; complexed with mn, vgi
  19. Domain(s) for 2wrm:
  20. Domain(s) for 2zku:
    1. 2572116Domain d2zkua_: 2zku A: [171292]
      automated match to d1nb4a_
      complexed with acy, gol
    2. 2572117Domain d2zkub_: 2zku B: [171293]
      automated match to d1nb4a_
      complexed with acy, gol
    3. 2572118Domain d2zkuc_: 2zku C: [171294]
      automated match to d1nb4a_
      complexed with acy, gol
    4. 2572119Domain d2zkud_: 2zku D: [171295]
      automated match to d1nb4a_
      complexed with acy, gol
  21. Domain(s) for 3ciz:
    1. 2572104Domain d3ciza1: 3ciz A:2-563 [173264]
      Other proteins in same PDB: d3ciza2, d3cizb2
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx1, zn
    2. 2572105Domain d3cizb1: 3ciz B:2-564 [173265]
      Other proteins in same PDB: d3ciza2, d3cizb2
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx1, zn
  22. Domain(s) for 3cj0:
    1. 2572108Domain d3cj0a1: 3cj0 A:2-563 [173266]
      Other proteins in same PDB: d3cj0a2, d3cj0b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx2
    2. 2572109Domain d3cj0b1: 3cj0 B:2-563 [173267]
      Other proteins in same PDB: d3cj0a2, d3cj0b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx2
  23. Domain(s) for 3cj2:
    1. 2572102Domain d3cj2a1: 3cj2 A:2-562 [173268]
      Other proteins in same PDB: d3cj2a2, d3cj2b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx3
    2. 2572103Domain d3cj2b1: 3cj2 B:2-562 [173269]
      Other proteins in same PDB: d3cj2a2, d3cj2b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx3
  24. Domain(s) for 3cj3:
    1. 2572114Domain d3cj3a1: 3cj3 A:2-563 [173270]
      Other proteins in same PDB: d3cj3a2, d3cj3b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx4
    2. 2572115Domain d3cj3b1: 3cj3 B:2-563 [173271]
      Other proteins in same PDB: d3cj3a2, d3cj3b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx4
  25. Domain(s) for 3cj4:
    1. 2572148Domain d3cj4a1: 3cj4 A:2-562 [173272]
      Other proteins in same PDB: d3cj4a2, d3cj4b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx5
    2. 2572149Domain d3cj4b1: 3cj4 B:2-562 [173273]
      Other proteins in same PDB: d3cj4a2, d3cj4b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with ni, sx5
  26. Domain(s) for 3cj5:
    1. 2572112Domain d3cj5a1: 3cj5 A:2-563 [173274]
      Other proteins in same PDB: d3cj5a2, d3cj5b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx6
    2. 2572113Domain d3cj5b1: 3cj5 B:2-564 [173275]
      Other proteins in same PDB: d3cj5a2, d3cj5b2
      automated match to d1nb4a_
      protein/RNA complex; complexed with sx6
  27. Domain(s) for 3frz:
  28. Domain(s) for 3h59:
    1. 2572139Domain d3h59a1: 3h59 A:2-562 [177195]
      Other proteins in same PDB: d3h59a2, d3h59b2
      automated match to d1nb4a_
      complexed with h59
    2. 2572140Domain d3h59b1: 3h59 B:2-562 [177196]
      Other proteins in same PDB: d3h59a2, d3h59b2
      automated match to d1nb4a_
      complexed with h59
  29. Domain(s) for 3h5s:
    1. 2572129Domain d3h5sa1: 3h5s A:2-562 [177201]
      Other proteins in same PDB: d3h5sa2, d3h5sb2
      automated match to d1nb4a_
      complexed with h5s
    2. 2572130Domain d3h5sb1: 3h5s B:2-562 [177202]
      Other proteins in same PDB: d3h5sa2, d3h5sb2
      automated match to d1nb4a_
      complexed with h5s
  30. Domain(s) for 3h5u:
    1. 2572123Domain d3h5ua1: 3h5u A:2-563 [177203]
      Other proteins in same PDB: d3h5ua2, d3h5ub2
      automated match to d1nb4a_
      complexed with h5u
    2. 2572124Domain d3h5ub1: 3h5u B:2-563 [177204]
      Other proteins in same PDB: d3h5ua2, d3h5ub2
      automated match to d1nb4a_
      complexed with h5u
  31. Domain(s) for 3hky:
    1. 2572163Domain d3hkya1: 3hky A:1-563 [177660]
      Other proteins in same PDB: d3hkya2
      automated match to d1nb4a_
      complexed with cl, ix6, so4
    2. 2572164Domain d3hkyb_: 3hky B: [177661]
      Other proteins in same PDB: d3hkya2
      automated match to d1nb4a_
      complexed with cl, ix6, so4
  32. Domain(s) for 3lkh:
    1. 2572135Domain d3lkha_: 3lkh A: [180342]
      automated match to d1nb4a_
      complexed with lt6
    2. 2572136Domain d3lkhb_: 3lkh B: [180343]
      automated match to d1nb4a_
      complexed with lt6
  33. Domain(s) for 3mf5:
    1. 2572110Domain d3mf5a1: 3mf5 A:2-562 [181043]
      Other proteins in same PDB: d3mf5a2, d3mf5b2
      automated match to d1c2pb_
      complexed with gol, hjz
    2. 2572111Domain d3mf5b1: 3mf5 B:2-562 [181044]
      Other proteins in same PDB: d3mf5a2, d3mf5b2
      automated match to d1c2pb_
      complexed with gol, hjz
  34. Domain(s) for 3mwv:
    1. 2572200Domain d3mwva_: 3mwv A: [181653]
      automated match to d1nb4a_
    2. 2572201Domain d3mwvb_: 3mwv B: [181654]
      automated match to d1nb4a_
  35. Domain(s) for 3mww:
    1. 2572227Domain d3mwwa_: 3mww A: [181655]
      automated match to d1nb4a_
      complexed with biw, so4
    2. 2572228Domain d3mwwb_: 3mww B: [181656]
      automated match to d1nb4a_
      complexed with biw, so4
  36. Domain(s) for 3q0z:
    1. 2572156Domain d3q0za_: 3q0z A: [184133]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, so4
    2. 2572157Domain d3q0zb_: 3q0z B: [184134]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, so4
  37. Domain(s) for 3qgd:
    1. 2572186Domain d3qgda_: 3qgd A: [184371]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, 26s, so4
    2. 2572187Domain d3qgdb_: 3qgd B: [184372]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, 26s, so4
  38. Domain(s) for 3qge:
    1. 2572215Domain d3qgea_: 3qge A: [248881]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 26f, so4
    2. 2572216Domain d3qgeb_: 3qge B: [248882]
      automated match to d3q0za_
      protein/RNA complex; complexed with 23e, 26f, so4
  39. Domain(s) for 3qgf:
    1. 2572184Domain d3qgfa_: 3qgf A: [184373]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, 46f, so4
    2. 2572185Domain d3qgfb_: 3qgf B: [184374]
      automated match to d1nb4a_
      protein/RNA complex; complexed with 23e, 46f, so4
  40. Domain(s) for 3ska:
  41. Domain(s) for 3skh:
    1. 2572174Domain d3skha_: 3skh A: [216431]
      automated match to d3lkha_
      protein/RNA complex; complexed with 058
    2. 2572175Domain d3skhb_: 3skh B: [216432]
      automated match to d3lkha_
      protein/RNA complex; complexed with 058
  42. Domain(s) for 3tyq:
    1. 2572095Domain d3tyqa_: 3tyq A: [186013]
      automated match to d1nb4a_
      protein/RNA complex; complexed with hi4, po4
    2. 2572096Domain d3tyqb_: 3tyq B: [186014]
      automated match to d1nb4a_
      protein/RNA complex; complexed with hi4, po4
  43. Domain(s) for 3tyv:
    1. 2572133Domain d3tyva_: 3tyv A: [186015]
      automated match to d1nb4a_
      protein/RNA complex; complexed with hi3, po4
    2. 2572134Domain d3tyvb_: 3tyv B: [186016]
      automated match to d1nb4a_
      protein/RNA complex; complexed with hi3, po4
  44. Domain(s) for 3u4o:
    1. 2572099Domain d3u4oa_: 3u4o A: [186076]
      automated match to d1nb4a_
      complexed with 08e, po4
    2. 2572100Domain d3u4ob_: 3u4o B: [186077]
      automated match to d1nb4a_
      complexed with 08e, po4
  45. Domain(s) for 3u4r:
    1. 2572131Domain d3u4ra_: 3u4r A: [186078]
      automated match to d1nb4a_
      complexed with 08f
    2. 2572132Domain d3u4rb_: 3u4r B: [186079]
      automated match to d1nb4a_
      complexed with 08f
  46. Domain(s) for 4dru:
    1. 2572127Domain d4drua_: 4dru A: [195587]
      automated match to d1nb4a_
      complexed with 0ln, gol, so4
    2. 2572128Domain d4drub_: 4dru B: [195588]
      automated match to d1nb4a_
      complexed with 0ln, gol, so4
  47. Domain(s) for 4eaw:
    1. 2572178Domain d4eawa_: 4eaw A: [196703]
      automated match to d1nb4a_
      complexed with 0nq, edo, peg, so4
    2. 2572179Domain d4eawb_: 4eaw B: [201821]
      automated match to d4eawa_
      complexed with 0nq, edo, peg, so4
  48. Domain(s) for 4gmc:
    1. 2572198Domain d4gmca_: 4gmc A: [221997]
      automated match to d3mwva_
      complexed with 1bi, so4
    2. 2572199Domain d4gmcb_: 4gmc B: [221998]
      automated match to d3mwva_
      complexed with 1bi, so4
  49. Domain(s) for 4ih5:
    1. 2572106Domain d4ih5a1: 4ih5 A:2-562 [223170]
      Other proteins in same PDB: d4ih5a2, d4ih5b2
      automated match to d3mf5a_
      complexed with 12r
    2. 2572107Domain d4ih5b1: 4ih5 B:2-562 [223171]
      Other proteins in same PDB: d4ih5a2, d4ih5b2
      automated match to d3mf5a_
      complexed with 12r
  50. Domain(s) for 4ih6:
    1. 2572150Domain d4ih6a1: 4ih6 A:2-562 [223172]
      Other proteins in same PDB: d4ih6a2, d4ih6b2
      automated match to d3mf5a_
      complexed with 1ep
    2. 2572151Domain d4ih6b1: 4ih6 B:2-562 [223173]
      Other proteins in same PDB: d4ih6a2, d4ih6b2
      automated match to d3mf5a_
      complexed with 1ep
  51. Domain(s) for 4ih7:
    1. 2572168Domain d4ih7a1: 4ih7 A:2-562 [223174]
      Other proteins in same PDB: d4ih7a2, d4ih7b2
      automated match to d3mf5a_
      complexed with 1er, zn
    2. 2572169Domain d4ih7b1: 4ih7 B:2-562 [223175]
      Other proteins in same PDB: d4ih7a2, d4ih7b2
      automated match to d3mf5a_
      complexed with 1er, zn
  52. Domain(s) for 4iz0:
  53. Domain(s) for 4j04:
    1. 2572120Domain d4j04a_: 4j04 A: [223496]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jf, mn
    2. 2572121Domain d4j04b_: 4j04 B: [223497]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jf, mn
  54. Domain(s) for 4j06:
    1. 2572125Domain d4j06a_: 4j06 A: [223498]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jg
    2. 2572126Domain d4j06b_: 4j06 B: [223499]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jg
  55. Domain(s) for 4j08:
    1. 2572146Domain d4j08a_: 4j08 A: [223500]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jh
    2. 2572147Domain d4j08b_: 4j08 B: [223501]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jh
  56. Domain(s) for 4j0a:
    1. 2572190Domain d4j0aa_: 4j0a A: [223502]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jl
    2. 2572191Domain d4j0ab_: 4j0a B: [223503]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1jl
  57. Domain(s) for 4jjs:
    1. 2572206Domain d4jjsa_: 4jjs A: [223845]
      automated match to d3mwva_
      complexed with 1m9, mg
    2. 2572207Domain d4jjsb_: 4jjs B: [223846]
      automated match to d3mwva_
      complexed with 1m9, mg
  58. Domain(s) for 4jju:
  59. Domain(s) for 4jty:
    1. 2572209Domain d4jtya_: 4jty A: [224025]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nv, gol, mg
    2. 2572210Domain d4jtyb_: 4jty B: [224026]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nv, gol, mg
  60. Domain(s) for 4jtz:
    1. 2572223Domain d4jtza_: 4jtz A: [224027]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nw, gol, mg
    2. 2572224Domain d4jtzb_: 4jtz B: [224028]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nw, gol, mg
  61. Domain(s) for 4ju1:
    1. 2572217Domain d4ju1a_: 4ju1 A: [224029]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nz, gol, mg
    2. 2572218Domain d4ju1b_: 4ju1 B: [224030]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1nz, gol, mg
  62. Domain(s) for 4ju2:
    1. 2572213Domain d4ju2a_: 4ju2 A: [224031]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o0, gol, mg
    2. 2572214Domain d4ju2b_: 4ju2 B: [224032]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o0, gol, mg
  63. Domain(s) for 4ju3:
    1. 2572172Domain d4ju3a_: 4ju3 A: [229256]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o1, mg
    2. 2572173Domain d4ju3b_: 4ju3 B: [229260]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o1, mg
  64. Domain(s) for 4ju4:
    1. 2572202Domain d4ju4a_: 4ju4 A: [229261]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o3, mg
    2. 2572203Domain d4ju4b_: 4ju4 B: [229262]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o3, mg
  65. Domain(s) for 4ju6:
    1. 2572192Domain d4ju6a_: 4ju6 A: [229258]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o6, mg
    2. 2572193Domain d4ju6b_: 4ju6 B: [229257]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o6, mg
  66. Domain(s) for 4ju7:
    1. 2572204Domain d4ju7a_: 4ju7 A: [229255]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o6, mg
    2. 2572205Domain d4ju7b_: 4ju7 B: [229259]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1o6, mg
  67. Domain(s) for 4jvq:
    1. 2572188Domain d4jvqa_: 4jvq A: [236552]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1ml, gol, mg
    2. 2572189Domain d4jvqb_: 4jvq B: [236553]
      automated match to d3mwva_
      protein/RNA complex; complexed with 1ml, gol, mg
  68. Domain(s) for 4mk7:
    1. 2572221Domain d4mk7a1: 4mk7 A:2-562 [228253]
      Other proteins in same PDB: d4mk7a2, d4mk7b2
      automated match to d3mf5a_
      complexed with 28o, dms, mg
    2. 2572222Domain d4mk7b1: 4mk7 B:2-562 [228252]
      Other proteins in same PDB: d4mk7a2, d4mk7b2
      automated match to d3mf5a_
      complexed with 28o, dms, mg
  69. Domain(s) for 4mk8:
    1. 2572170Domain d4mk8a1: 4mk8 A:2-562 [228259]
      Other proteins in same PDB: d4mk8a2, d4mk8b2
      automated match to d3mf5a_
      complexed with 28q, dms, gol
    2. 2572171Domain d4mk8b1: 4mk8 B:2-562 [228261]
      Other proteins in same PDB: d4mk8a2, d4mk8b2
      automated match to d3mf5a_
      complexed with 28q, dms, gol
  70. Domain(s) for 4mk9:
    1. 2572158Domain d4mk9a1: 4mk9 A:2-562 [228258]
      Other proteins in same PDB: d4mk9a2, d4mk9b2
      automated match to d3mf5a_
      complexed with 28r, gol
    2. 2572159Domain d4mk9b1: 4mk9 B:2-562 [228260]
      Other proteins in same PDB: d4mk9a2, d4mk9b2
      automated match to d3mf5a_
      complexed with 28r, gol
  71. Domain(s) for 4mka:
    1. 2572154Domain d4mkaa1: 4mka A:2-562 [228256]
      Other proteins in same PDB: d4mkaa2, d4mkab2
      automated match to d3mf5a_
      complexed with 2ay, dms, gol
    2. 2572155Domain d4mkab1: 4mka B:2-562 [228257]
      Other proteins in same PDB: d4mkaa2, d4mkab2
      automated match to d3mf5a_
      complexed with 2ay, dms, gol
  72. Domain(s) for 4mkb:
    1. 2572141Domain d4mkba1: 4mkb A:2-562 [228254]
      Other proteins in same PDB: d4mkba2, d4mkbb2
      automated match to d3mf5a_
      complexed with 28v
    2. 2572142Domain d4mkbb1: 4mkb B:2-562 [228255]
      Other proteins in same PDB: d4mkba2, d4mkbb2
      automated match to d3mf5a_
      complexed with 28v

More info for Species Hepatitis C virus [TaxId:11103] from e.8.1.4 Viral RNA polymerase

Timeline for Species Hepatitis C virus [TaxId:11103] from e.8.1.4 Viral RNA polymerase: