SCOPe 2.04: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.04
Class a: All alpha proteins [46456] (285 folds)
Fold a.60: SAM domain-like [47768] (16 superfamilies)
4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
Superfamily a.60.1: SAM/Pointed domain [47769] (4 families)
Family a.60.1.0: automated matches [191306] (1 protein)
not a true family
Protein automated matches [190031] (2 species)
not a true protein

Species:

Fruit fly (Drosophila melanogaster) [TaxId:7227] [186750] (2 PDB entries)
1. Domain for 1pk1:
  - Domain d1pk1d_: 1pk1 D: [118714]
    Other proteins in same PDB: d1pk1a1, d1pk1b1, d1pk1c_
    automated match to d1kw4a_
2. Domains for 1pk3:
  1. Domain d1pk3b_: 1pk3 B: [118716]
    Other proteins in same PDB: d1pk3a1
    automated match to d1kw4a_
    complexed with bme
  2. Domain d1pk3c_: 1pk3 C: [118717]
    Other proteins in same PDB: d1pk3a1
    automated match to d1kw4a_
    complexed with bme
Human (Homo sapiens) [TaxId:9606] [188353] (18 PDB entries)
1. Domain for 2dkx:
  - Domain d2dkxa_: 2dkx A: [241586]
    automated match to d1lkyb_
2. Domain for 2e8n:
  - Domain d2e8na_: 2e8n A: [241706]
    automated match to d1ucva_
3. Domain for 2eam:
  - Domain d2eama_: 2eam A: [241710]
    automated match to d1v38a_
4. Domain for 2ean:
  - Domain d2eana_: 2ean A: [241711]
    automated match to d3bs5b_
5. Domain for 2eao:
  - Domain d2eaoa_: 2eao A: [241712]
    automated match to d3h8mb_
6. Domain for 2k4p:
  - Domain d2k4pa_: 2k4p A: [242377]
    automated match to d3h8ma_
7. Domain for 2ke7:
  - Domain d2ke7a_: 2ke7 A: [242477]
    automated match to d3hilb_
8. Domains for 2kiv:
  1. Domain d2kiva1: 2kiv A:1-69 [242531]
    automated match to d1b4fg_
  2. Domain d2kiva2: 2kiv A:70-135 [242532]
    automated match to d1b4fg_
9. Domains for 2kso:
  1. Domain d2ksoa_: 2kso A: [242636]
    automated match to d1f0ma_
  2. Domain d2ksob_: 2kso B: [242637]
    automated match to d2qkqa_
10. Domain for 2lmr:
  - Domain d2lmra_: 2lmr A: [242937]
    automated match to d1v38a_
11. Domain for 2y9t:
  - Domain d2y9ta_: 2y9t A: [244713]
    automated match to d1coka_
    mutant
12. Domains for 3bq7:
  1. Domain d3bq7a_: 3bq7 A: [172782]
    automated match to d2f3na1
  2. Domain d3bq7b_: 3bq7 B: [172783]
    automated match to d2f3na1
  3. Domain d3bq7c_: 3bq7 C: [172784]
    automated match to d2f3na1
  4. Domain d3bq7d_: 3bq7 D: [172785]
    automated match to d2f3na1
  5. Domain d3bq7e_: 3bq7 E: [172786]
    automated match to d2f3na1
  6. Domain d3bq7f_: 3bq7 F: [172787]
    automated match to d2f3na1
13. Domain for 3bs5:
  - Domain d3bs5b_: 3bs5 B: [172803]
    automated match to d1wwva1
14. Domains for 3h8m:
  1. Domain d3h8ma_: 3h8m A: [210909]
    automated match to d1b4fb_
  2. Domain d3h8mb_: 3h8m B: [210910]
    automated match to d1b4fb_
15. Domains for 3hil:
  1. Domain d3hila_: 3hil A: [211077]
    automated match to d3kkaa_
    complexed with cl, no3
  2. Domain d3hilb_: 3hil B: [211078]
    automated match to d3kkaa_
    complexed with cl, no3
16. Domains for 3kka:
  1. Domain d3kkaa_: 3kka A: [196506]
    automated match to d3kkad_
    complexed with cl
  2. Domain d3kkab_: 3kka B: [196505]
    automated match to d3kkad_
    complexed with cl
  3. Domain d3kkac_: 3kka C: [179398]
    automated match to d1f0ma_
    complexed with cl
  4. Domain d3kkad_: 3kka D: [179399]
    automated match to d1f0ma_
    complexed with cl
  5. Domain d3kkae_: 3kka E: [179400]
    automated match to d1f0ma_
    complexed with cl
17. Domains for 3sei:
  1. Domain d3seia1: 3sei A:1-71 [249393]
    automated match to d1b4fg_
    complexed with cl, so4
  2. Domain d3seia2: 3sei A:72-146 [249394]
    automated match to d1b4fg_
    complexed with cl, so4
  3. Domain d3seib1: 3sei B:1-71 [249395]
    automated match to d1b4fg_
    complexed with cl, so4
  4. Domain d3seib2: 3sei B:72-142 [249396]
    automated match to d1b4fg_
    complexed with cl, so4
18. Domains for 4mhv:
  1. Domain d4mhva_: 4mhv A: [236463]
    automated match to d1sxda_
    complexed with act, ca, gol
  2. Domain d4mhvb_: 4mhv B: [236462]
    automated match to d1sxda_
    complexed with act, ca, gol

More info for Protein automated matches from a.60.1.0: automated matches

Timeline for Protein automated matches from a.60.1.0: automated matches:

Protein automated matches from a.60.1.0: automated matches first appeared in SCOPe 2.01
Protein automated matches from a.60.1.0: automated matches appears in SCOPe 2.03
Protein automated matches from a.60.1.0: automated matches appears in SCOPe 2.05
Protein automated matches from a.60.1.0: automated matches appears in the current release, SCOPe 2.08