Lineage for Protein: The origin DNA-binding domain of SV40 T-antigen

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
    alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325
  4. Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families) (S)
  5. Family d.89.1.1: The origin DNA-binding domain of SV40 T-antigen [55465] (2 proteins)
  6. Protein The origin DNA-binding domain of SV40 T-antigen [55466] (2 species)

Species:

  1. Jc polyomavirus [TaxId:10632] [237285] (4 PDB entries)
    1. Domain for 4lif:
    2. Domains for 4lmd:
      1. Domain d4lmda_: 4lmd A: [238171]
        automated match to d4lifa_
        complexed with flc, gol
      2. Domain d4lmdb_: 4lmd B: [238170]
        automated match to d4lifa_
        complexed with flc, gol
    3. Domain for 4nbp:
    4. Domain for 5cyn:
  2. Simian virus 40, Sv40 [TaxId:10633] [55467] (10 PDB entries)
    1. Domain for 1tbd:
    2. Domain for 2fuf:
    3. Domains for 2if9:
      1. Domain d2if9a2: 2if9 A:131-260 [137327]
        Other proteins in same PDB: d2if9a3, d2if9b3
        automated match to d1tbd__
      2. Domain d2if9b2: 2if9 B:131-260 [137328]
        Other proteins in same PDB: d2if9a3, d2if9b3
        automated match to d1tbd__
    4. Domains for 2ipr:
      1. Domain d2ipra_: 2ipr A: [137583]
        automated match to d1tbd__
      2. Domain d2iprb_: 2ipr B: [137584]
        automated match to d1tbd__
    5. Domains for 2itj:
      1. Domain d2itja_: 2itj A: [137640]
        automated match to d1tbd__
      2. Domain d2itjb_: 2itj B: [137641]
        automated match to d1tbd__
    6. Domains for 2itl:
      1. Domain d2itla_: 2itl A: [137644]
        automated match to d1tbd__
        protein/DNA complex
      2. Domain d2itlb_: 2itl B: [137645]
        automated match to d1tbd__
        protein/DNA complex
    7. Domain for 2nl8:
    8. Domains for 2ntc:
      1. Domain d2ntca_: 2ntc A: [138577]
        automated match to d1tbd__
        protein/DNA complex
      2. Domain d2ntcb_: 2ntc B: [138578]
        automated match to d1tbd__
        protein/DNA complex
    9. Domain for 2tbd:
    10. Domain for 3qk2:

More info for Protein The origin DNA-binding domain of SV40 T-antigen from d.89.1.1: The origin DNA-binding domain of SV40 T-antigen

Timeline for Protein The origin DNA-binding domain of SV40 T-antigen from d.89.1.1: The origin DNA-binding domain of SV40 T-antigen: