Lineage for d5cyna_ (5cyn A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2963164Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
    alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325
  4. 2963165Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families) (S)
  5. 2963166Family d.89.1.1: The origin DNA-binding domain of SV40 T-antigen [55465] (2 proteins)
  6. 2963167Protein The origin DNA-binding domain of SV40 T-antigen [55466] (2 species)
  7. 2963168Species Jc polyomavirus [TaxId:10632] [237285] (4 PDB entries)
  8. 2963173Domain d5cyna_: 5cyn A: [279890]
    automated match to d4lmdb_
    complexed with edo; mutant

Details for d5cyna_

PDB Entry: 5cyn (more details), 2.7 Å

PDB Description: jc virus large t-antigen origin binding domain f258l mutant
PDB Compounds: (A:) large t antigen

SCOPe Domain Sequences for d5cyna_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5cyna_ d.89.1.1 (A:) The origin DNA-binding domain of SV40 T-antigen {Jc polyomavirus [TaxId: 10632]}
vedpkdfpvdlhaflsqavfsnrtvasfavyttkekaqilykklmekysvtfisrhgfgg
hnilffltphrhrvsainnycqklctfsflickgvnkeylfysalcrqpyavveesiqgg
lkehdln

SCOPe Domain Coordinates for d5cyna_:

Click to download the PDB-style file with coordinates for d5cyna_.
(The format of our PDB-style files is described here.)

Timeline for d5cyna_: