SCOPe 2.08: Domain d1tbda1: 1tbd A:3-132

Lineage for d1tbda1 (1tbd A:3-132)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.89: Origin of replication-binding domain, RBD-like [55463] (1 superfamily)
   alpha-beta-alpha-beta(2)-alpha-beta-alpha-beta; 3 layers: a/b/a; antiparallel sheet 41325

4. Superfamily d.89.1: Origin of replication-binding domain, RBD-like [55464] (6 families)

5. Family d.89.1.1: The origin DNA-binding domain of SV40 T-antigen [55465] (2 proteins)

6. Protein The origin DNA-binding domain of SV40 T-antigen [55466] (2 species)

7. Species Simian virus 40, Sv40 [TaxId:10633] [55467] (10 PDB entries)

8. Domain d1tbda1: 1tbd A:3-132 [40240]
   Other proteins in same PDB: d1tbda2, d1tbda3

Details for d1tbda1

PDB Entry: 1tbd

PDB Description: solution structure of the origin dna binding domain of sv40 t-antigen, nmr, minimized average structure

PDB Compounds: (A:) sv40 t-antigen

SCOPe Domain Sequences for d1tbda1:

Sequence; same for both SEQRES and ATOM records:

>d1tbda1 d.89.1.1 (A:3-132) The origin DNA-binding domain of SV40 T-antigen {Simian virus 40, Sv40 [TaxId: 10633]}
kvedpkdfpsellsflshavfsnrtlacfaiyttkekaallykkimekysvtfisrhnsy
nhnilffltphrhrvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslpg
glkehdfnpe

Timeline for d1tbda1:

• d1tbda1 first appeared (with stable ids) in SCOP 1.55, called d1tbd__
  
• d1tbda1 appears in SCOPe 2.07