Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2947085Fold d.51: Eukaryotic type KH-domain (KH-domain type I) [54790] (1 superfamily)
    beta-alpha(2)-beta(2)-alpha; 2 layers: alpha/beta
  4. 2947086Superfamily d.51.1: Eukaryotic type KH-domain (KH-domain type I) [54791] (2 families) (S)
    Prokaryotic and eukaryotic domains share a KH-motif but have different topologies
  5. 2947194Family d.51.1.0: automated matches [227159] (1 protein)
    not a true family
  6. 2947195Protein automated matches [226866] (4 species)
    not a true protein

Species:

  1. 2947196Human (Homo sapiens) [TaxId:9606] [225002] (11 PDB entries)
    1. Domains for 1zzi:
      1. 2947198Domain d1zzia2: 1zzi A:11-89 [125904]
        Other proteins in same PDB: d1zzia3
        automated match to d1ec6a_
        protein/DNA complex
      2. 2947199Domain d1zzib_: 1zzi B: [125905]
        Other proteins in same PDB: d1zzia3
        automated match to d1ec6a_
        protein/DNA complex
    2. Domains for 1zzj:
      1. 2947209Domain d1zzja2: 1zzj A:11-83 [125906]
        Other proteins in same PDB: d1zzja3, d1zzjb3, d1zzjc3
        automated match to d1ec6a_
        protein/DNA complex
      2. 2947210Domain d1zzjb2: 1zzj B:11-81 [125907]
        Other proteins in same PDB: d1zzja3, d1zzjb3, d1zzjc3
        automated match to d1ec6a_
        protein/DNA complex
      3. 2947211Domain d1zzjc2: 1zzj C:11-81 [125908]
        Other proteins in same PDB: d1zzja3, d1zzjb3, d1zzjc3
        automated match to d1ec6a_
        protein/DNA complex
    3. Domain for 1zzk:
    4. Domains for 2ann:
      1. 2947212Domain d2anna1: 2ann A:5-76 [241236]
        Other proteins in same PDB: d2anna3
        automated match to d1dtjd_
        protein/RNA complex; complexed with k, mg
      2. 2947213Domain d2anna2: 2ann A:106-177 [241237]
        Other proteins in same PDB: d2anna3
        automated match to d1dtjd_
        protein/RNA complex; complexed with k, mg
    5. Domains for 2anr:
      1. 2947207Domain d2anra1: 2anr A:5-76 [241238]
        Other proteins in same PDB: d2anra3
        automated match to d1dtjd_
        protein/RNA complex; complexed with k, mg
      2. 2947208Domain d2anra2: 2anr A:106-178 [241239]
        Other proteins in same PDB: d2anra3
        automated match to d1dtjd_
        protein/RNA complex; complexed with k, mg
    6. Domain for 2hh2:
    7. Domain for 2hh3:
    8. Domain for 2opu:
    9. Domain for 6y24:
    10. Domains for 6y2c:
      1. 2947205Domain d6y2ca_: 6y2c A: [382914]
        Other proteins in same PDB: d6y2cb2
        automated match to d2opva_
        complexed with edo, zn
      2. 2947206Domain d6y2cb1: 6y2c B:261-350 [412211]
        Other proteins in same PDB: d6y2cb2
        automated match to d6y2ca_
        complexed with edo, zn
    11. Domains for 6y2d:
      1. 2947201Domain d6y2da1: 6y2d A:185-257 [382905]
        Other proteins in same PDB: d6y2da2, d6y2db2, d6y2dd2
        automated match to d4lija_
        complexed with gol, so4
      2. 2947202Domain d6y2db1: 6y2d B:185-256 [382900]
        Other proteins in same PDB: d6y2da2, d6y2db2, d6y2dd2
        automated match to d4lija_
        complexed with gol, so4
      3. 2947203Domain d6y2dc_: 6y2d C: [382912]
        Other proteins in same PDB: d6y2da2, d6y2db2, d6y2dd2
        automated match to d4lija_
        complexed with gol, so4
      4. 2947204Domain d6y2dd1: 6y2d D:185-256 [382923]
        Other proteins in same PDB: d6y2da2, d6y2db2, d6y2dd2
        automated match to d4lija_
        complexed with gol, so4
  2. 2947217Pyrococcus horikoshii OT3 [TaxId:70601] [225353] (1 PDB entry)
  3. 2947220Pyrococcus horikoshii [TaxId:53953] [225879] (1 PDB entry)
  4. 2947223Sulfolobus solfataricus [TaxId:2287] [255920] (1 PDB entry)

More info for Protein automated matches from d.51.1.0: automated matches

Timeline for Protein automated matches from d.51.1.0: automated matches: