SCOPe 2.08: Protein: Endonuclease VIII

Lineage for Protein: Endonuclease VIII

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.156: S13-like H2TH domain [81297] (1 superfamily)
core: 3-4 helices
Superfamily a.156.1: S13-like H2TH domain [46946] (4 families)
contains a helix-two turns-helix (H2TH) motif
Family a.156.1.2: Middle domain of MutM-like DNA repair proteins [81626] (3 proteins)
contains 4 helices in the core
Protein Endonuclease VIII [81703] (1 species)

Species:

Escherichia coli [TaxId:562] [81704] (8 PDB entries)
Uniprot P50465
1. Domain for 1k3w:
  - Domain d1k3wa1: 1k3w A:125-214 [77239]
    Other proteins in same PDB: d1k3wa2, d1k3wa3
    protein/DNA complex; complexed with so4, zn
2. Domain for 1k3x:
  - Domain d1k3xa1: 1k3x A:125-213 [77242]
    Other proteins in same PDB: d1k3xa2, d1k3xa3
    protein/DNA complex; complexed with gol, so4, zn
3. Domain for 1q39:
  - Domain d1q39a1: 1q39 A:125-213 [104515]
    Other proteins in same PDB: d1q39a2, d1q39a3
    complexed with ca, zn
4. Domain for 1q3b:
  - Domain d1q3ba1: 1q3b A:125-213 [104518]
    Other proteins in same PDB: d1q3ba2, d1q3ba3
    complexed with gol, mg, zn; mutant
5. Domain for 1q3c:
  - Domain d1q3ca1: 1q3c A:125-213 [104521]
    Other proteins in same PDB: d1q3ca2, d1q3ca3
    complexed with gol, mg, zn; mutant
6. Domain for 2ea0:
  - Domain d2ea0a1: 2ea0 A:125-214 [146754]
    Other proteins in same PDB: d2ea0a2, d2ea0a3
    automated match to d1k3wa1
    protein/DNA complex; complexed with gol, so4, zn
7. Domain for 2opf:
  - Domain d2opfa1: 2opf A:125-213 [148963]
    Other proteins in same PDB: d2opfa2, d2opfa3
    automated match to d1q3ba1
    protein/DNA complex; complexed with gol, so4, zn
8. Domains for 2oq4:
  1. Domain d2oq4a1: 2oq4 A:125-213 [148978]
    Other proteins in same PDB: d2oq4a2, d2oq4a3, d2oq4b2, d2oq4b3
    automated match to d2ea0a1
    protein/DNA complex; complexed with na, so4, zn
  2. Domain d2oq4b1: 2oq4 B:125-212 [148981]
    Other proteins in same PDB: d2oq4a2, d2oq4a3, d2oq4b2, d2oq4b3
    automated match to d2ea0a1
    protein/DNA complex; complexed with na, so4, zn

More info for Protein Endonuclease VIII from a.156.1.2: Middle domain of MutM-like DNA repair proteins

Timeline for Protein Endonuclease VIII from a.156.1.2: Middle domain of MutM-like DNA repair proteins:

Protein Endonuclease VIII from a.156.1.2: Middle domain of MutM-like DNA repair proteins first appeared in SCOP 1.63
Protein Endonuclease VIII from a.156.1.2: Middle domain of MutM-like DNA repair proteins appears in SCOPe 2.07