Lineage for d2opfa1 (2opf A:125-213)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2013619Fold a.156: S13-like H2TH domain [81297] (1 superfamily)
    core: 3-4 helices
  4. 2013620Superfamily a.156.1: S13-like H2TH domain [46946] (4 families) (S)
    contains a helix-two turns-helix (H2TH) motif
  5. 2013695Family a.156.1.2: Middle domain of MutM-like DNA repair proteins [81626] (3 protein domains)
    contains 4 helices in the core
  6. 2013738Protein Endonuclease VIII [81703] (1 species)
  7. 2013739Species Escherichia coli [TaxId:562] [81704] (8 PDB entries)
    Uniprot P50465
  8. 2013743Domain d2opfa1: 2opf A:125-213 [148963]
    Other proteins in same PDB: d2opfa2, d2opfa3
    automated match to d1q3ba1
    protein/DNA complex; complexed with gol, so4, zn

Details for d2opfa1

PDB Entry: 2opf (more details), 1.85 Å

PDB Description: Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (R252A) in complex with AP-site containing DNA substrate
PDB Compounds: (A:) Endonuclease VIII

SCOPe Domain Sequences for d2opfa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2opfa1 a.156.1.2 (A:125-213) Endonuclease VIII {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d2opfa1:

Click to download the PDB-style file with coordinates for d2opfa1.
(The format of our PDB-style files is described here.)

Timeline for d2opfa1: