Lineage for d2opfa1 (2opf A:125-213)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2735301Fold a.156: S13-like H2TH domain [81297] (1 superfamily)
    core: 3-4 helices
  4. 2735302Superfamily a.156.1: S13-like H2TH domain [46946] (4 families) (S)
    contains a helix-two turns-helix (H2TH) motif
  5. 2735377Family a.156.1.2: Middle domain of MutM-like DNA repair proteins [81626] (3 proteins)
    contains 4 helices in the core
  6. 2735420Protein Endonuclease VIII [81703] (1 species)
  7. 2735421Species Escherichia coli [TaxId:562] [81704] (8 PDB entries)
    Uniprot P50465
  8. 2735425Domain d2opfa1: 2opf A:125-213 [148963]
    Other proteins in same PDB: d2opfa2, d2opfa3
    automated match to d1q3ba1
    protein/DNA complex; complexed with gol, so4, zn

Details for d2opfa1

PDB Entry: 2opf (more details), 1.85 Å

PDB Description: crystal structure of the dna repair enzyme endonuclease-viii (nei) from e. coli (r252a) in complex with ap-site containing dna substrate
PDB Compounds: (A:) Endonuclease VIII

SCOPe Domain Sequences for d2opfa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2opfa1 a.156.1.2 (A:125-213) Endonuclease VIII {Escherichia coli [TaxId: 562]}
vgpdvldpnltpevvkerllsprfrnrqfagllldqaflaglgnylrveilwqvgltgnh
kakdlnaaqldalahalleiprfsyatrg

SCOPe Domain Coordinates for d2opfa1:

Click to download the PDB-style file with coordinates for d2opfa1.
(The format of our PDB-style files is described here.)

Timeline for d2opfa1: