SCOPe 2.08: Domain d2oq4b3: 2oq4 B:223-262

Lineage for d2oq4b3 (2oq4 B:223-262)

1. Root: SCOPe 2.08

2. Class g: Small proteins [56992] (100 folds)

3. Fold g.39: Glucocorticoid receptor-like (DNA-binding domain) [57715] (1 superfamily)
   alpha+beta metal(zinc)-bound fold

4. Superfamily g.39.1: Glucocorticoid receptor-like (DNA-binding domain) [57716] (19 families)

5. Family g.39.1.8: C-terminal, Zn-finger domain of MutM-like DNA repair proteins [81627] (3 proteins)

6. Protein Endonuclease VIII [82917] (1 species)

7. Species Escherichia coli [TaxId:562] [82918] (8 PDB entries)
   Uniprot P50465

8. Domain d2oq4b3: 2oq4 B:223-262 [148983]
   Other proteins in same PDB: d2oq4a1, d2oq4a2, d2oq4b1, d2oq4b2
   automated match to d1k3xa3
   protein/DNA complex; complexed with na, so4, zn

Details for d2oq4b3

PDB Entry: 2oq4, 2.6 Å

PDB Description: crystal structure of the dna repair enzyme endonuclease-viii (nei) from e. coli (e2q) in complex with ap-site containing dna substrate

PDB Compounds: (B:) Endonuclease VIII

SCOPe Domain Sequences for d2oq4b3:

Sequence, based on SEQRES records:

>d2oq4b3 g.39.1.8 (B:223-262) Endonuclease VIII {Escherichia coli [TaxId: 562]}
alfrfkvfhrdgepcercgsiiekttlssrpfywcpgcqh

Sequence, based on observed residues (ATOM records):

>d2oq4b3 g.39.1.8 (B:223-262) Endonuclease VIII {Escherichia coli [TaxId: 562]}
alfrfkvfhrdgepcercgsiiekttlssrpfywccqh

Timeline for d2oq4b3:

• d2oq4b3 first appeared in SCOP 1.75
  
• d2oq4b3 appears in SCOPe 2.07