Lineage for Protein: Exonuclease domain of prokaryotic DNA polymerase

  1. Root: SCOP 1.65
  2. 305035Class c: Alpha and beta proteins (a/b) [51349] (121 folds)
  3. 316624Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 316908Superfamily c.55.3: Ribonuclease H-like [53098] (7 families) (S)
    consists of one domain of this fold
  5. 317107Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (6 proteins)
  6. 317130Protein Exonuclease domain of prokaryotic DNA polymerase [53119] (3 species)
    part of Klenow fragment, KF

Species:

  1. 317131Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId:1422] [53122] (10 PDB entries)
    1. Domain for 1l3s:
    2. Domain for 1l3t:
    3. Domain for 1l3u:
    4. Domain for 1l3v:
    5. Domain for 1l5u:
    6. Domains for 1lv5:
      1. 317141Domain d1lv5a1: 1lv5 A:297-468 [84719]
        Other proteins in same PDB: d1lv5a2, d1lv5b2
      2. 317142Domain d1lv5b1: 1lv5 B:297-468 [84721]
        Other proteins in same PDB: d1lv5a2, d1lv5b2
        complexed with dcp, mg, mn, so4; mutant
    7. Domain for 1xwl:
    8. Domain for 2bdp:
    9. Domain for 3bdp:
    10. Domain for 4bdp:
  2. 317143Escherichia coli [TaxId:562] [53120] (14 PDB entries)
    1. Domain for 1d8y:
    2. Domain for 1d9d:
    3. Domain for 1d9f:
    4. Domain for 1dpi:
    5. Domain for 1kfd:
    6. Domain for 1kfs:
    7. Domain for 1kln:
    8. Domain for 1krp:
    9. Domain for 1ksp:
    10. Domain for 1qsl:
    11. Domain for 2kfn:
    12. Domain for 2kfz:
    13. Domain for 2kzm:
    14. Domain for 2kzz:
  3. 317158Thermus aquaticus [TaxId:271] [53121] (13 PDB entries)
    1. Domain for 1bgx:
    2. Domain for 1cmw:
    3. Domain for 1jxe:
    4. Domain for 1ktq:
    5. Domain for 1qss:
    6. Domain for 1qsy:
    7. Domain for 1qtm:
    8. Domain for 1taq:
    9. Domain for 1tau:
    10. Domain for 2ktq:
    11. Domain for 3ktq:
    12. Domain for 4ktq:
    13. Domain for 5ktq:

More info for Protein Exonuclease domain of prokaryotic DNA polymerase from c.55.3.5: DnaQ-like 3'-5' exonuclease

Timeline for Protein Exonuclease domain of prokaryotic DNA polymerase from c.55.3.5: DnaQ-like 3'-5' exonuclease: