SCOPe 2.08: Protein: beta-amylase

Lineage for Protein: beta-amylase

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.3: Prealbumin-like [49451] (8 superfamilies)
sandwich; 7 strands in 2 sheets, greek-key
variations: some members have additional 1-2 strands to common fold
Superfamily b.3.1: Starch-binding domain-like [49452] (4 families)
Family b.3.1.1: Starch-binding domain [49453] (3 proteins)
automatically mapped to Pfam PF00686
Protein beta-amylase [49462] (1 species)

Species:

Bacillus cereus [TaxId:1396] [49463] (12 PDB entries)
1. Domain for 1b90:
  - Domain d1b90a1: 1b90 A:418-516 [22533]
    Other proteins in same PDB: d1b90a2
    complexed with act, ca, so4
2. Domain for 1b9z:
  - Domain d1b9za1: 1b9z A:418-516 [22528]
    Other proteins in same PDB: d1b9za2
    complexed with act, ca, so4
3. Domain for 1cqy:
  - Domain d1cqya_: 1cqy A: [22527]
4. Domain for 1itc:
  - Domain d1itca1: 1itc A:418-516 [83705]
    Other proteins in same PDB: d1itca2
    complexed with acy, ca, so4
5. Domains for 1j0y:
  1. Domain d1j0ya1: 1j0y A:418-516 [83916]
    Other proteins in same PDB: d1j0ya2, d1j0yb2, d1j0yc2, d1j0yd2
    complexed with bgc, ca
  2. Domain d1j0yb1: 1j0y B:418-516 [83918]
    Other proteins in same PDB: d1j0ya2, d1j0yb2, d1j0yc2, d1j0yd2
    complexed with bgc, ca
  3. Domain d1j0yc1: 1j0y C:418-516 [83920]
    Other proteins in same PDB: d1j0ya2, d1j0yb2, d1j0yc2, d1j0yd2
    complexed with bgc, ca
  4. Domain d1j0yd1: 1j0y D:418-516 [83922]
    Other proteins in same PDB: d1j0ya2, d1j0yb2, d1j0yc2, d1j0yd2
    complexed with bgc, ca
6. Domains for 1j0z:
  1. Domain d1j0za1: 1j0z A:418-516 [83924]
    Other proteins in same PDB: d1j0za2, d1j0zb2, d1j0zc2, d1j0zd2
    complexed with ca
  2. Domain d1j0zb1: 1j0z B:418-516 [83926]
    Other proteins in same PDB: d1j0za2, d1j0zb2, d1j0zc2, d1j0zd2
    complexed with ca
  3. Domain d1j0zc1: 1j0z C:418-516 [83928]
    Other proteins in same PDB: d1j0za2, d1j0zb2, d1j0zc2, d1j0zd2
    complexed with ca
  4. Domain d1j0zd1: 1j0z D:418-516 [83930]
    Other proteins in same PDB: d1j0za2, d1j0zb2, d1j0zc2, d1j0zd2
    complexed with ca
7. Domains for 1j10:
  1. Domain d1j10a1: 1j10 A:418-516 [83932]
    Other proteins in same PDB: d1j10a2, d1j10b2, d1j10c2, d1j10d2
    complexed with ca
  2. Domain d1j10b1: 1j10 B:418-516 [83934]
    Other proteins in same PDB: d1j10a2, d1j10b2, d1j10c2, d1j10d2
    complexed with ca
  3. Domain d1j10c1: 1j10 C:418-516 [83936]
    Other proteins in same PDB: d1j10a2, d1j10b2, d1j10c2, d1j10d2
    complexed with ca
  4. Domain d1j10d1: 1j10 D:418-516 [83938]
    Other proteins in same PDB: d1j10a2, d1j10b2, d1j10c2, d1j10d2
    complexed with ca
8. Domains for 1j11:
  1. Domain d1j11a1: 1j11 A:418-516 [83940]
    Other proteins in same PDB: d1j11a2, d1j11b2, d1j11c2, d1j11d2
    complexed with ca, epg
  2. Domain d1j11b1: 1j11 B:418-516 [83942]
    Other proteins in same PDB: d1j11a2, d1j11b2, d1j11c2, d1j11d2
    complexed with ca, epg
  3. Domain d1j11c1: 1j11 C:418-516 [83944]
    Other proteins in same PDB: d1j11a2, d1j11b2, d1j11c2, d1j11d2
    complexed with ca, epg
  4. Domain d1j11d1: 1j11 D:418-516 [83946]
    Other proteins in same PDB: d1j11a2, d1j11b2, d1j11c2, d1j11d2
    complexed with ca, epg
9. Domains for 1j12:
  1. Domain d1j12a1: 1j12 A:418-516 [83948]
    Other proteins in same PDB: d1j12a2, d1j12b2, d1j12c2, d1j12d2
    complexed with ca, ebg
  2. Domain d1j12b1: 1j12 B:418-516 [83950]
    Other proteins in same PDB: d1j12a2, d1j12b2, d1j12c2, d1j12d2
    complexed with ca, ebg
  3. Domain d1j12c1: 1j12 C:418-516 [83952]
    Other proteins in same PDB: d1j12a2, d1j12b2, d1j12c2, d1j12d2
    complexed with ca, ebg
  4. Domain d1j12d1: 1j12 D:418-516 [83954]
    Other proteins in same PDB: d1j12a2, d1j12b2, d1j12c2, d1j12d2
    complexed with ca, ebg
10. Domain for 1j18:
  - Domain d1j18a1: 1j18 A:418-516 [83956]
    Other proteins in same PDB: d1j18a2
    complexed with acy, ca, so4
11. Domain for 1vem:
  - Domain d1vema1: 1vem A:418-516 [120021]
    Other proteins in same PDB: d1vema2
    automated match to d1j18a1
    complexed with ca
12. Domains for 5bca:
  1. Domain d5bcaa1: 5bca A:418-516 [22529]
    Other proteins in same PDB: d5bcaa2, d5bcab2, d5bcac2, d5bcad2
    complexed with ca
  2. Domain d5bcab1: 5bca B:418-516 [22530]
    Other proteins in same PDB: d5bcaa2, d5bcab2, d5bcac2, d5bcad2
    complexed with ca
  3. Domain d5bcac1: 5bca C:418-516 [22531]
    Other proteins in same PDB: d5bcaa2, d5bcab2, d5bcac2, d5bcad2
    complexed with ca
  4. Domain d5bcad1: 5bca D:418-516 [22532]
    Other proteins in same PDB: d5bcaa2, d5bcab2, d5bcac2, d5bcad2
    complexed with ca

More info for Protein beta-amylase from b.3.1.1: Starch-binding domain

Timeline for Protein beta-amylase from b.3.1.1: Starch-binding domain:

Protein beta-amylase from b.3.1.1: Starch-binding domain first appeared (with stable ids) in SCOP 1.55
Protein beta-amylase from b.3.1.1: Starch-binding domain appears in SCOPe 2.07