Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2698054Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 2698055Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 2699133Family a.22.1.3: TBP-associated factors, TAFs [47134] (14 proteins)
  6. 2699191Protein automated matches [194413] (5 species)
    not a true protein

Species:

  1. 2699192Aspergillus nidulans [TaxId:227321] [194414] (2 PDB entries)
    1. Domain for 4g91:
    2. Domain for 4g92:
  2. 2699195Human (Homo sapiens) [TaxId:9606] [270229] (3 PDB entries)
    1. Domains for 4csr:
      1. 2699196Domain d4csra_: 4csr A: [270231]
        automated match to d4g92b_
        complexed with gol
      2. 2699197Domain d4csrb_: 4csr B: [270230]
        automated match to d1n1jb_
        complexed with gol
    2. Domains for 7ah8:
      1. 3084158Domain d7ah8b_: 7ah8 B: [420475]
        automated match to d4csrb_
        complexed with flc, gol, svr
      2. 3084163Domain d7ah8c_: 7ah8 C: [420480]
        automated match to d4g92b_
        complexed with flc, gol, svr
      3. 3084172Domain d7ah8a_: 7ah8 A: [420489]
        automated match to d4g92b_
        complexed with flc, gol, svr
      4. 3084198Domain d7ah8d_: 7ah8 D: [420515]
        automated match to d4csrb_
        complexed with flc, gol, svr
    3. Domain for 7egf:
  3. 2699199Oryza sativa [TaxId:39947] [389873] (1 PDB entry)
  4. 2699204Rice (Oryza sativa) [TaxId:4530] [391301] (1 PDB entry)
  5. 2699207Thale cress (Arabidopsis thaliana) [TaxId:3702] [326898] (3 PDB entries)
    1. Domains for 5g49:
      1. 2699214Domain d5g49a1: 5g49 A:55-147 [326899]
        Other proteins in same PDB: d5g49a2
        automated match to d4g92b_
        complexed with act, ca
      2. 2699215Domain d5g49b_: 5g49 B: [326904]
        Other proteins in same PDB: d5g49a2
        automated match to d4csrb_
        complexed with act, ca
    2. Domains for 6r0m:
      1. 2699210Domain d6r0ma1: 6r0m A:24-116 [391295]
        Other proteins in same PDB: d6r0ma2, d6r0mc2
        automated match to d4g92b_
      2. 2699211Domain d6r0mb_: 6r0m B: [391291]
        Other proteins in same PDB: d6r0ma2, d6r0mc2
        automated match to d5g49b_
      3. 2699212Domain d6r0mc1: 6r0m C:24-116 [391326]
        Other proteins in same PDB: d6r0ma2, d6r0mc2
        automated match to d4g92b_
      4. 2699213Domain d6r0md_: 6r0m D: [391288]
        Other proteins in same PDB: d6r0ma2, d6r0mc2
        automated match to d5g49b_
    3. Domains for 6r0n:
      1. 2699208Domain d6r0na_: 6r0n A: [391297]
        automated match to d4g92b_
        complexed with gol
      2. 2699209Domain d6r0nb_: 6r0n B: [391378]
        automated match to d5g49b_
        complexed with gol

More info for Protein automated matches from a.22.1.3: TBP-associated factors, TAFs

Timeline for Protein automated matches from a.22.1.3: TBP-associated factors, TAFs: