Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2837913Superfamily c.1.12: Phosphoenolpyruvate/pyruvate domain [51621] (8 families) (S)
  5. 2838112Family c.1.12.7: Phosphoenolpyruvate mutase/Isocitrate lyase-like [88704] (4 proteins)
    forms a swapped dimer
  6. 2838206Protein automated matches [190974] (9 species)
    not a true protein

Species:

  1. 2838207Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [420121] (1 PDB entry)
  2. 2838212Burkholderia pseudomallei [TaxId:28450] [225729] (1 PDB entry)
  3. 2838217Burkholderia pseudomallei [TaxId:331109] [188638] (1 PDB entry)
  4. 2838234Gibberella zeae [TaxId:229533] [316245] (1 PDB entry)
  5. 2838237Magnaporthe oryzae [TaxId:242507] [316238] (2 PDB entries)
    1. Domains for 5e9f:
      1. 2838242Domain d5e9fa_: 5e9f A: [316247]
        automated match to d1dqua_
        complexed with mg
      2. 2838243Domain d5e9fb_: 5e9f B: [316239]
        automated match to d1dqua_
        complexed with mg
      3. 2838244Domain d5e9fc_: 5e9f C: [316328]
        automated match to d1dqua_
        complexed with mg
      4. 2838245Domain d5e9fd_: 5e9f D: [316244]
        automated match to d1dqua_
        complexed with mg
    2. Domains for 5e9g:
      1. 2838238Domain d5e9ga_: 5e9g A: [316400]
        automated match to d1dqua_
        complexed with glv, gol, mg
      2. 2838239Domain d5e9gb_: 5e9g B: [316277]
        automated match to d1dqua_
        complexed with glv, gol, mg
      3. 2838240Domain d5e9gc_: 5e9g C: [316387]
        automated match to d1dqua_
        complexed with glv, gol, mg
      4. 2838241Domain d5e9gd_: 5e9g D: [316312]
        automated match to d1dqua_
        complexed with glv, gol, mg
  6. 2838246Pseudomonas aeruginosa [TaxId:208964] [391754] (2 PDB entries)
    1. Domains for 6t4v:
      1. 2838247Domain d6t4va_: 6t4v A: [391755]
        automated match to d3eooi_
        complexed with pyr
      2. 2838248Domain d6t4vb_: 6t4v B: [391790]
        automated match to d3eooi_
        complexed with pyr
      3. 2838249Domain d6t4vc_: 6t4v C: [391794]
        automated match to d3eooi_
        complexed with pyr
      4. 2838250Domain d6t4vd_: 6t4v D: [391873]
        automated match to d3eooi_
        complexed with pyr
    2. Domains for 6t5m:
      1. 2838251Domain d6t5ma_: 6t5m A: [391830]
        automated match to d3eooi_
        complexed with mg, pyr
      2. 2838252Domain d6t5mb_: 6t5m B: [391832]
        automated match to d3eooi_
        complexed with mg, pyr
      3. 2838253Domain d6t5mc_: 6t5m C: [391831]
        automated match to d3eooi_
        complexed with mg, pyr
      4. 2838254Domain d6t5md_: 6t5m D: [391849]
        automated match to d3eooi_
        complexed with mg, pyr
  7. 2838255Yeast (Candida albicans) [TaxId:5476] [405205] (1 PDB entry)
  8. 2838264Yersinia pestis [TaxId:632] [189309] (1 PDB entry)
  9. 3084518Bacillus cereus [TaxId:226900] [420835] (2 PDB entries)
    1. Domains for 7cmx:
      1. 3084519Domain d7cmxb_: 7cmx B: [420836]
        automated match to d6xppa_
      2. 3084521Domain d7cmxc_: 7cmx C: [420838]
        automated match to d6xppa_
      3. 3084529Domain d7cmxa_: 7cmx A: [420846]
        automated match to d6xppa_
      4. 3084534Domain d7cmxd_: 7cmx D: [420851]
        automated match to d6xppa_
    2. Domain for 7cmy:

More info for Protein automated matches from c.1.12.7: Phosphoenolpyruvate mutase/Isocitrate lyase-like

Timeline for Protein automated matches from c.1.12.7: Phosphoenolpyruvate mutase/Isocitrate lyase-like: