PDB entry 5e9g

View 5e9g on RCSB PDB site
Description: Structural insights of isocitrate lyases from Magnaporthe oryzae
Class: lyase
Keywords: tim beta/alpha-barrel, lyase activity, lyase
Deposited on 2015-10-15, released 2016-04-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-05-18, with a file datestamp of 2016-05-13.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: isocitrate lyase
    Species: Magnaporthe oryzae 70-15 [TaxId:242507]
    Gene: ICL1, MGG_04895
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CT06
      • engineered mutation (218)
    Domains in SCOPe 2.08: d5e9ga_
  • Chain 'B':
    Compound: isocitrate lyase
    Species: Magnaporthe oryzae 70-15 [TaxId:242507]
    Gene: ICL1, MGG_04895
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CT06
      • engineered mutation (218)
    Domains in SCOPe 2.08: d5e9gb_
  • Chain 'C':
    Compound: isocitrate lyase
    Species: Magnaporthe oryzae 70-15 [TaxId:242507]
    Gene: ICL1, MGG_04895
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CT06
      • engineered mutation (218)
    Domains in SCOPe 2.08: d5e9gc_
  • Chain 'D':
    Compound: isocitrate lyase
    Species: Magnaporthe oryzae 70-15 [TaxId:242507]
    Gene: ICL1, MGG_04895
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CT06
      • engineered mutation (218)
    Domains in SCOPe 2.08: d5e9gd_
  • Heterogens: GLV, GOL, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5e9gA (A:)
masknmvnpavepsmeddlfarevaevkqwwsdprwrytkrpftaeqivskrgnlkieyp
snaqskklwkilegrfqkrdasytygcleptmvtqmakyldtvyvsgwqssstasssdep
gpdladypyttvpnkvshlfmaqlfhdrkqrherlsapksersklqnidylrpiiadadt
ghggltavmkltklfiekgaagihiedqapgtkkcghmggkvlvpisehinrlvairaqa
dimgvdllaiartdaeaatlittsidprdhafilgctnpslqpladlmntaeqsgktgdq
lqaiedewmakanlkrfddavvdvinssssirnpkdvaakylqaakgksnrearaiassl
gvpeiffdwdsprtregyfrikggcdcainraiayapyadaiwmesklpdyeqakefaeg
vhavypeqklaynlspsfnwktamprdeqetyirrlaglgycwqfitlaglhttalisdr
faraysevgmraygelvqepemelgvdvvkhqkwsgatyvdelqkmvtggvsstaamgkg
vtedqfhaaalehhhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5e9gA (A:)
nmvnpavepsmeddlfarevaevkqwwsdprwrytkrpftaeqivskrgnlkieypsnaq
skklwkilegrfqkrdasytygcleptmvtqmakyldtvyvsgwqssstasssdepgpdl
adypyttvpnkvshlfmaqlfhdrkqrherlsapksersklqnidylrpiiadadtghgg
ltavmkltklfiekgaagihiedqapgtkkcghmggkvlvpisehinrlvairaqadimg
vdllaiartdaeaatlittsidprdhafilgctnpslqpladlmntaeqsgktgdqlqai
edewmakanlkrfddavvdvinssssirnpkdvaakylqaakgksnrearaiasslgvpe
iffdwdsprtregyfrikggcdcainraiayapyadaiwmesklpdyeqakefaegvhav
ypeqklaynlspsfnwktamprdeqetyirrlaglgycwqfitlaglhttalisdrfara
ysevgmraygelvqepemelgvdvvkhqkwsgatyvdelqkmvt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5e9gB (B:)
masknmvnpavepsmeddlfarevaevkqwwsdprwrytkrpftaeqivskrgnlkieyp
snaqskklwkilegrfqkrdasytygcleptmvtqmakyldtvyvsgwqssstasssdep
gpdladypyttvpnkvshlfmaqlfhdrkqrherlsapksersklqnidylrpiiadadt
ghggltavmkltklfiekgaagihiedqapgtkkcghmggkvlvpisehinrlvairaqa
dimgvdllaiartdaeaatlittsidprdhafilgctnpslqpladlmntaeqsgktgdq
lqaiedewmakanlkrfddavvdvinssssirnpkdvaakylqaakgksnrearaiassl
gvpeiffdwdsprtregyfrikggcdcainraiayapyadaiwmesklpdyeqakefaeg
vhavypeqklaynlspsfnwktamprdeqetyirrlaglgycwqfitlaglhttalisdr
faraysevgmraygelvqepemelgvdvvkhqkwsgatyvdelqkmvtggvsstaamgkg
vtedqfhaaalehhhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5e9gB (B:)
nmvnpavepsmeddlfarevaevkqwwsdprwrytkrpftaeqivskrgnlkieypsnaq
skklwkilegrfqkrdasytygcleptmvtqmakyldtvyvsgwqssstasssdepgpdl
adypyttvpnkvshlfmaqlfhdrkqrherlsapksersklqnidylrpiiadadtghgg
ltavmkltklfiekgaagihiedqapgtkkcghmggkvlvpisehinrlvairaqadimg
vdllaiartdaeaatlittsidprdhafilgctnpslqpladlmntaeqsgktgdqlqai
edewmakanlkrfddavvdvinssssirnpkdvaakylqaakgksnrearaiasslgvpe
iffdwdsprtregyfrikggcdcainraiayapyadaiwmesklpdyeqakefaegvhav
ypeqklaynlspsfnwktamprdeqetyirrlaglgycwqfitlaglhttalisdrfara
ysevgmraygelvqepemelgvdvvkhqkwsgatyvdelqkmvtg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5e9gC (C:)
masknmvnpavepsmeddlfarevaevkqwwsdprwrytkrpftaeqivskrgnlkieyp
snaqskklwkilegrfqkrdasytygcleptmvtqmakyldtvyvsgwqssstasssdep
gpdladypyttvpnkvshlfmaqlfhdrkqrherlsapksersklqnidylrpiiadadt
ghggltavmkltklfiekgaagihiedqapgtkkcghmggkvlvpisehinrlvairaqa
dimgvdllaiartdaeaatlittsidprdhafilgctnpslqpladlmntaeqsgktgdq
lqaiedewmakanlkrfddavvdvinssssirnpkdvaakylqaakgksnrearaiassl
gvpeiffdwdsprtregyfrikggcdcainraiayapyadaiwmesklpdyeqakefaeg
vhavypeqklaynlspsfnwktamprdeqetyirrlaglgycwqfitlaglhttalisdr
faraysevgmraygelvqepemelgvdvvkhqkwsgatyvdelqkmvtggvsstaamgkg
vtedqfhaaalehhhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5e9gC (C:)
nmvnpavepsmeddlfarevaevkqwwsdprwrytkrpftaeqivskrgnlkieypsnaq
skklwkilegrfqkrdasytygcleptmvtqmakyldtvyvsgwqssstasssdepgpdl
adypyttvpnkvshlfmaqlfhdrkqrherlsapksersklqnidylrpiiadadtghgg
ltavmkltklfiekgaagihiedqapgtkkcghmggkvlvpisehinrlvairaqadimg
vdllaiartdaeaatlittsidprdhafilgctnpslqpladlmntaiedewmakanlkr
fddavvdvinakylqaakgksnrearaiasslgvpeiffdwdsprtregyfrikggcdca
inraiayapyadaiwmesklpdyeqakefaegvhavypeqklaynlspsfnwktamprde
qetyirrlaglgycwqfitlaglhttalisdrfaraysevgmraygelvqepemelgvdv
vkhqkwsgatyvdelqkmv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5e9gD (D:)
masknmvnpavepsmeddlfarevaevkqwwsdprwrytkrpftaeqivskrgnlkieyp
snaqskklwkilegrfqkrdasytygcleptmvtqmakyldtvyvsgwqssstasssdep
gpdladypyttvpnkvshlfmaqlfhdrkqrherlsapksersklqnidylrpiiadadt
ghggltavmkltklfiekgaagihiedqapgtkkcghmggkvlvpisehinrlvairaqa
dimgvdllaiartdaeaatlittsidprdhafilgctnpslqpladlmntaeqsgktgdq
lqaiedewmakanlkrfddavvdvinssssirnpkdvaakylqaakgksnrearaiassl
gvpeiffdwdsprtregyfrikggcdcainraiayapyadaiwmesklpdyeqakefaeg
vhavypeqklaynlspsfnwktamprdeqetyirrlaglgycwqfitlaglhttalisdr
faraysevgmraygelvqepemelgvdvvkhqkwsgatyvdelqkmvtggvsstaamgkg
vtedqfhaaalehhhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5e9gD (D:)
nmvnpavepsmeddlfarevaevkqwwsdprwrytkrpftaeqivskrgnlkieypsnaq
skklwkilegrfqkrdasytygcleptmvtqmakyldtvyvsgwqssstasssdepgpdl
adypyttvpnkvshlfmaqlfhdrkqrherlsapksersklqnidylrpiiadadtghgg
ltavmkltklfiekgaagihiedqapgtkkcghmggkvlvpisehinrlvairaqadimg
vdllaiartdaeaatlittsidprdhafilgctnpslqpladlmnewmakanlkrfddav
vdakylqaakgksnrearaiassffdwdsprtregyfrikggcdcainraiayapyadai
wmesklpdyeqakefaegvhavypeqklaynlspsfnwkamprdeqetyirrlaglgycw
qfitlaglhttalisdrfaraysevgmraygelvqepemelgvdvvkhqkwsgatyvdel
qkmvtg