Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1688640Fold d.299: Ns1 effector domain-like [143020] (1 superfamily)
    beta-X-beta(5)-alpha-beta-alpha; 2 layers: a/b; bifurcated beta-sheet; order 23654[1,7]
  4. 1688641Superfamily d.299.1: Ns1 effector domain-like [143021] (1 family) (S)
    automatically mapped to Pfam PF00600
  5. 1688642Family d.299.1.1: Ns1 effector domain-like [143022] (2 proteins)
    C-terminal part of Pfam PF00600
  6. 1688647Protein automated matches [190936] (6 species)
    not a true protein

Species:

  1. 1688648Influenza a virus (a/udorn/307/1972(h3n2)) [TaxId:381517] [188730] (2 PDB entries)
    1. Domains for 3ee8:
      1. 1688651Domain d3ee8a_: 3ee8 A: [174883]
        automated match to d2gx9a1
      2. 1688652Domain d3ee8b_: 3ee8 B: [174884]
        automated match to d2gx9a1
    2. Domains for 3ee9:
      1. 1688649Domain d3ee9a_: 3ee9 A: [174885]
        automated match to d2gx9a1
        complexed with so4
      2. 1688650Domain d3ee9b_: 3ee9 B: [174886]
        automated match to d2gx9a1
        complexed with so4
  2. 1688653Influenza A virus [TaxId:11320] [188483] (1 PDB entry)
  3. 1688656Influenza A virus [TaxId:221021] [255355] (1 PDB entry)
  4. 1688658Influenza A virus [TaxId:381517] [189222] (10 PDB entries)
    1. Domains for 3d6r:
      1. 1688660Domain d3d6ra_: 3d6r A: [209031]
        automated match to d3kwgb_
      2. 1688661Domain d3d6rb1: 3d6r B:83-202 [209032]
        automated match to d3kwgb_
    2. Domains for 3kwg:
      1. 1688664Domain d3kwga_: 3kwg A: [179750]
        automated match to d2gx9a1
        mutant
      2. 1688665Domain d3kwgb_: 3kwg B: [179751]
        automated match to d2gx9a1
        mutant
    3. Domains for 3kwi:
      1. 1688666Domain d3kwia_: 3kwi A: [179752]
        automated match to d2gx9a1
        mutant
      2. 1688667Domain d3kwib_: 3kwi B: [179753]
        automated match to d2gx9a1
        mutant
    4. Domains for 3l4q:
      1. 1688674Domain d3l4qa_: 3l4q A: [247332]
        automated match to d3kwgb_
        complexed with gol
      2. 1688675Domain d3l4qb_: 3l4q B: [247333]
        automated match to d3kwgb_
        complexed with gol
    5. Domains for 3o9q:
      1. 1688672Domain d3o9qa_: 3o9q A: [214251]
        automated match to d3kwgb_
        mutant
      2. 1688673Domain d3o9qb_: 3o9q B: [214252]
        automated match to d3kwgb_
        mutant
    6. Domains for 3o9r:
      1. 1688662Domain d3o9ra_: 3o9r A: [214253]
        automated match to d3kwgb_
        mutant
      2. 1688663Domain d3o9rb_: 3o9r B: [214254]
        automated match to d3kwgb_
        mutant
    7. Domains for 3o9s:
      1. 1688670Domain d3o9sa_: 3o9s A: [214255]
        automated match to d3kwgb_
      2. 1688671Domain d3o9sb_: 3o9s B: [214256]
        automated match to d3kwgb_
    8. Domains for 3o9t:
      1. 1688668Domain d3o9ta_: 3o9t A: [214257]
        automated match to d3kwgb_
        complexed with p6g
      2. 1688669Domain d3o9tb_: 3o9t B: [214258]
        automated match to d3kwgb_
        complexed with p6g
    9. Domains for 3oa9:
      1. 1688676Domain d3oa9a_: 3oa9 A: [214268]
        automated match to d3kwgb_
      2. 1688677Domain d3oa9b_: 3oa9 B: [214269]
        automated match to d3kwgb_
    10. Domain for 3rvc:
  5. 1688678Influenza A virus [TaxId:641809] [189299] (1 PDB entry)
  6. 1688685Influenza A virus [TaxId:680789] [189731] (3 PDB entries)
    1. Domains for 3p31:
      1. 1688686Domain d3p31a_: 3p31 A: [183479]
        automated match to d2gx9a1
        complexed with scn
      2. 1688687Domain d3p31b_: 3p31 B: [183480]
        automated match to d2gx9a1
        complexed with scn
      3. 1688688Domain d3p31c_: 3p31 C: [183481]
        automated match to d2gx9a1
        complexed with scn
      4. 1688689Domain d3p31d_: 3p31 D: [183482]
        automated match to d2gx9a1
        complexed with scn
    2. Domains for 3p38:
      1. 1688690Domain d3p38a_: 3p38 A: [183483]
        automated match to d2gx9a1
        mutant
      2. 1688691Domain d3p38b_: 3p38 B: [183484]
        automated match to d2gx9a1
        mutant
      3. 1688692Domain d3p38c_: 3p38 C: [183485]
        automated match to d2gx9a1
        mutant
    3. Domains for 3p39:
      1. 1688693Domain d3p39a_: 3p39 A: [248408]
        automated match to d3p38a_
        mutant
      2. 1688694Domain d3p39b_: 3p39 B: [248409]
        automated match to d3p38a_
        mutant
      3. 1688695Domain d3p39c_: 3p39 C: [248410]
        automated match to d3p38a_
        mutant
      4. 1688696Domain d3p39d_: 3p39 D: [248411]
        automated match to d3p38a_
        mutant
      5. 1688697Domain d3p39e_: 3p39 E: [248412]
        automated match to d3p38a_
        mutant
      6. 1688698Domain d3p39f_: 3p39 F: [248413]
        automated match to d3p38a_
        mutant

More info for Protein automated matches from d.299.1.1: Ns1 effector domain-like

Timeline for Protein automated matches from d.299.1.1: Ns1 effector domain-like: