Lineage for d2bgwb1 (2bgw B:160-228)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1998807Superfamily a.60.2: RuvA domain 2-like [47781] (7 families) (S)
    duplication: contains two helix-hairpin-helix (HhH) motifs
  5. 1998863Family a.60.2.5: Hef domain-like [140629] (4 protein domains)
    helicase/nuclease domain; forms homo and heterodimers; probably includes the Excinuclease UvrC C-terminal domain ((81795), that contains a single NMR structure of a monomeric truncated domain, 1kft)
  6. 1998873Protein DNA repair endonuclease XPF [140634] (2 species)
  7. 1998874Species Aeropyrum pernix [TaxId:56636] [140635] (2 PDB entries)
    Uniprot Q9YC15 160-229
  8. 1998876Domain d2bgwb1: 2bgw B:160-228 [128502]
    Other proteins in same PDB: d2bgwa2, d2bgwb2
    automated match to d2bgwa1
    protein/DNA complex; complexed with mg, so4

Details for d2bgwb1

PDB Entry: 2bgw (more details), 2.8 Å

PDB Description: xpf from aeropyrum pernix, complex with dna
PDB Compounds: (B:) xpf endonuclease

SCOPe Domain Sequences for d2bgwb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2bgwb1 a.60.2.5 (B:160-228) DNA repair endonuclease XPF {Aeropyrum pernix [TaxId: 56636]}

SCOPe Domain Coordinates for d2bgwb1:

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Timeline for d2bgwb1:

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