Lineage for d2bgwa1 (2bgw A:160-229)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1998807Superfamily a.60.2: RuvA domain 2-like [47781] (7 families) (S)
    duplication: contains two helix-hairpin-helix (HhH) motifs
  5. 1998863Family a.60.2.5: Hef domain-like [140629] (4 protein domains)
    helicase/nuclease domain; forms homo and heterodimers; probably includes the Excinuclease UvrC C-terminal domain ((81795), that contains a single NMR structure of a monomeric truncated domain, 1kft)
  6. 1998873Protein DNA repair endonuclease XPF [140634] (2 species)
  7. 1998874Species Aeropyrum pernix [TaxId:56636] [140635] (2 PDB entries)
    Uniprot Q9YC15 160-229
  8. 1998875Domain d2bgwa1: 2bgw A:160-229 [128500]
    Other proteins in same PDB: d2bgwa2, d2bgwb2
    protein/DNA complex; complexed with mg, so4

Details for d2bgwa1

PDB Entry: 2bgw (more details), 2.8 Å

PDB Description: xpf from aeropyrum pernix, complex with dna
PDB Compounds: (A:) xpf endonuclease

SCOPe Domain Sequences for d2bgwa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2bgwa1 a.60.2.5 (A:160-229) DNA repair endonuclease XPF {Aeropyrum pernix [TaxId: 56636]}

SCOPe Domain Coordinates for d2bgwa1:

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Timeline for d2bgwa1:

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