Lineage for Species: Aeropyrum pernix [TaxId: 56636]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1998807Superfamily a.60.2: RuvA domain 2-like [47781] (7 families) (S)
    duplication: contains two helix-hairpin-helix (HhH) motifs
  5. 1998863Family a.60.2.5: Hef domain-like [140629] (4 protein domains)
    helicase/nuclease domain; forms homo and heterodimers; probably includes the Excinuclease UvrC C-terminal domain ((81795), that contains a single NMR structure of a monomeric truncated domain, 1kft)
  6. 1998873Protein DNA repair endonuclease XPF [140634] (2 species)
  7. 1998874Species Aeropyrum pernix [TaxId:56636] [140635] (2 PDB entries)
    Uniprot Q9YC15 160-229

PDB entries in Species: Aeropyrum pernix [TaxId: 56636]:

  1. Domain(s) for 2bgw:
    1. 1998875Domain d2bgwa1: 2bgw A:160-229 [128500]
      Other proteins in same PDB: d2bgwa2, d2bgwb2
      protein/DNA complex; complexed with mg, so4
    2. 1998876Domain d2bgwb1: 2bgw B:160-228 [128502]
      Other proteins in same PDB: d2bgwa2, d2bgwb2
      automated match to d2bgwa1
      protein/DNA complex; complexed with mg, so4
  2. Domain(s) for 2bhn:
    1. 1998877Domain d2bhna1: 2bhn A:160-229 [128534]
      Other proteins in same PDB: d2bhna2, d2bhnb2, d2bhnc2, d2bhnd2
      automatically matched to 2BGW A:160-229
    2. 1998878Domain d2bhnb1: 2bhn B:162-229 [128536]
      Other proteins in same PDB: d2bhna2, d2bhnb2, d2bhnc2, d2bhnd2
      automatically matched to 2BGW A:160-229
    3. 1998879Domain d2bhnc1: 2bhn C:164-229 [128538]
      Other proteins in same PDB: d2bhna2, d2bhnb2, d2bhnc2, d2bhnd2
      automatically matched to 2BGW A:160-229
    4. 1998880Domain d2bhnd1: 2bhn D:160-229 [128540]
      Other proteins in same PDB: d2bhna2, d2bhnb2, d2bhnc2, d2bhnd2
      automatically matched to 2BGW A:160-229

More info for Species Aeropyrum pernix [TaxId:56636] from a.60.2.5 DNA repair endonuclease XPF

Timeline for Species Aeropyrum pernix [TaxId:56636] from a.60.2.5 DNA repair endonuclease XPF: