SCOPe 2.05: Protein: Photosystem II core light harvesting protein PsbB

Lineage for Protein: Photosystem II core light harvesting protein PsbB

Root: SCOPe 2.05
Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)

Fold f.55: Photosystem II antenna protein-like [161076] (1 superfamily)
6 transmembrane helices arranged in three antiparallel pairs (hairpins), segregated by cofactors; there can be insertions of different small subdomains in different exposed loops

Superfamily f.55.1: Photosystem II antenna protein-like [161077] (1 family)
automatically mapped to Pfam PF00421
Family f.55.1.1: Photosystem II antenna protein-like [161078] (3 proteins)
Pfam PF00421
Protein Photosystem II core light harvesting protein PsbB [161079] (2 species)

Species:

Thermosynechococcus elongatus [TaxId:146786] [161080] (4 PDB entries)
Uniprot Q8DIQ1 2-489

Domain for 2axt:

Domain d2axtb1: 2axt B:2-489 [144927]
Other proteins in same PDB: d2axta1, d2axtc1, d2axtd1, d2axte1, d2axtf1, d2axth1, d2axti1, d2axtj1, d2axtk1, d2axtl1, d2axtm1, d2axto1, d2axtt1, d2axtu1, d2axtv_, d2axtz1
complexed with bcr, bct, ca, cla, dgd, fe2, hem, lhg, lmt, mge, oec, pho, pq9, sqd, unk

Domain for 3bz1:

Domain d3bz1b_: 3bz1 B: [199132]
Other proteins in same PDB: d3bz1a_, d3bz1c_, d3bz1d_, d3bz1e_, d3bz1f_, d3bz1h_, d3bz1i_, d3bz1j_, d3bz1k_, d3bz1l_, d3bz1m_, d3bz1o_, d3bz1t_, d3bz1u_, d3bz1v_, d3bz1z_
complexed with bcr, bct, ca, cl, cla, dgd, fe2, hem, lhg, lmg, lmt, oec, pho, pl9, sqd
complexed with bcr, bct, ca, cl, cla, dgd, fe2, hem, lhg, lmg, lmt, oec, pho, pl9, sqd

Domain for 3bz2:

Domain d3bz2b_: 3bz2 B: [199136]
Other proteins in same PDB: d3bz2a_, d3bz2c_, d3bz2d_, d3bz2e_, d3bz2f_, d3bz2h_, d3bz2i_, d3bz2j_, d3bz2k_, d3bz2l_, d3bz2m_, d3bz2o_, d3bz2t_, d3bz2u_, d3bz2v_, d3bz2z_
complexed with bcr, bct, ca, cl, cla, dgd, fe2, hem, lhg, lmg, lmt, oec, pho, pl9, sqd
complexed with bcr, bct, ca, cl, cla, dgd, fe2, hem, lhg, lmg, lmt, oec, pho, pl9, sqd

Domain for 4pj0:

Domain d4pj0b_: 4pj0 B: [260547]
Other proteins in same PDB: d4pj0a_, d4pj0c_, d4pj0d_, d4pj0e_, d4pj0f_, d4pj0h_, d4pj0i_, d4pj0j_, d4pj0l_, d4pj0m_, d4pj0o_, d4pj0t_, d4pj0u_, d4pj0v_, d4pj0z_
automated match to d2axtb1
complexed with bcr, bct, cl, cla, dgd, fe, hem, lhg, lmg, oex, pho, pl9, so4, sqd, unl

Thermosynechococcus vulcanus [TaxId:32053] [267722] (1 PDB entry)

Domain for 3a0h:

Domain d3a0hb_: 3a0h B: [264641]
Other proteins in same PDB: d3a0ha_, d3a0hc_, d3a0hd_, d3a0he_, d3a0hf_, d3a0hh_, d3a0hi_, d3a0hj_, d3a0hk_, d3a0hl_, d3a0hm_, d3a0hn_, d3a0ho_, d3a0ht_, d3a0hu_, d3a0hv_, d3a0hx_, d3a0hy_, d3a0hz_
complexed with bcr, cla, dgd, fe2, hem, iod, lhg, mge, oec, pho, pq9

More info for Protein Photosystem II core light harvesting protein PsbB from f.55.1.1: Photosystem II antenna protein-like

Timeline for Protein Photosystem II core light harvesting protein PsbB from f.55.1.1: Photosystem II antenna protein-like:

Protein Photosystem II core light harvesting protein PsbB from f.55.1.1: Photosystem II antenna protein-like first appeared in SCOP 1.75
Protein Photosystem II core light harvesting protein PsbB from f.55.1.1: Photosystem II antenna protein-like appears in SCOPe 2.04
Protein Photosystem II core light harvesting protein PsbB from f.55.1.1: Photosystem II antenna protein-like appears in SCOPe 2.06
Protein Photosystem II core light harvesting protein PsbB from f.55.1.1: Photosystem II antenna protein-like appears in the current release, SCOPe 2.08