SCOPe 2.08: Species: Escherichia coli [TaxId: 562]

Lineage for Species: Escherichia coli [TaxId: 562]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families)
duplication: consists of two similar domain swapped with C-terminal strands
Family d.21.1.2: PhzC/PhzF-like [89863] (4 proteins)
Pfam PF02567
Protein Hypothetical protein YddE [89864] (1 species)
Species Escherichia coli [TaxId:562] [89865] (4 PDB entries)
Uniprot P37757
structural genomics; NESG target ET25

PDB entries in Species: Escherichia coli [TaxId: 562]:

Domain(s) for 1p9v:
1. Domain d1p9va3: 1p9v A:14-141 [302880]
  Other proteins in same PDB: d1p9va5, d1p9va6
  automated match to d1sdja1
  complexed with so4
2. Domain d1p9va4: 1p9v A:142-309 [302881]
  Other proteins in same PDB: d1p9va5, d1p9va6
  automated match to d1sdja2
  complexed with so4
Domain(s) for 1qy9:
1. Domain d1qy9a1: 1qy9 A:3-129 [104645]
  Structural genomics target
  complexed with gol, oh
2. Domain d1qy9a2: 1qy9 A:130-297 [104646]
  Structural genomics target
  complexed with gol, oh
3. Domain d1qy9b1: 1qy9 B:3-129 [104647]
  Structural genomics target
  complexed with gol, oh
4. Domain d1qy9b2: 1qy9 B:130-297 [104648]
  Structural genomics target
  complexed with gol, oh
5. Domain d1qy9c1: 1qy9 C:2-129 [104649]
  Structural genomics target
  complexed with gol, oh
6. Domain d1qy9c2: 1qy9 C:130-297 [104650]
  Structural genomics target
  complexed with gol, oh
7. Domain d1qy9d1: 1qy9 D:1-129 [104651]
  Structural genomics target
  complexed with gol, oh
8. Domain d1qy9d2: 1qy9 D:130-297 [104652]
  Structural genomics target
  complexed with gol, oh
Domain(s) for 1qya:
1. Domain d1qyaa1: 1qya A:2-129 [104653]
  Other proteins in same PDB: d1qyaa3, d1qyab3
  Structural genomics target
2. Domain d1qyaa2: 1qya A:130-297 [104654]
  Other proteins in same PDB: d1qyaa3, d1qyab3
  Structural genomics target
3. Domain d1qyab1: 1qya B:2-129 [104655]
  Other proteins in same PDB: d1qyaa3, d1qyab3
  Structural genomics target
4. Domain d1qyab2: 1qya B:130-297 [104656]
  Other proteins in same PDB: d1qyaa3, d1qyab3
  Structural genomics target
Domain(s) for 1sdj:
1. Domain d1sdja1: 1sdj A:1-129 [98807]
  Other proteins in same PDB: d1sdja3, d1sdja4
  structural genomics; NESG target ET25
  complexed with so4
2. Domain d1sdja2: 1sdj A:130-297 [98808]
  Other proteins in same PDB: d1sdja3, d1sdja4
  structural genomics; NESG target ET25
  complexed with so4

More info for Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE

Timeline for Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE:

Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE first appeared in SCOP 1.65
Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE appears in SCOPe 2.07