Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164557Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. 2164558Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) (S)
    duplication: consists of two similar domain swapped with C-terminal strands
  5. 2164608Family d.21.1.2: PhzC/PhzF-like [89863] (4 protein domains)
    Pfam PF02567
  6. 2164619Protein Hypothetical protein YddE [89864] (1 species)
  7. 2164620Species Escherichia coli [TaxId:562] [89865] (4 PDB entries)
    Uniprot P37757
    structural genomics; NESG target ET25

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 1p9v:
    1. 2164633Domain d1p9va3: 1p9v A:14-141 [302880]
      Other proteins in same PDB: d1p9va5, d1p9va6
      automated match to d1sdja1
      complexed with so4
    2. 2164634Domain d1p9va4: 1p9v A:142-309 [302881]
      Other proteins in same PDB: d1p9va5, d1p9va6
      automated match to d1sdja2
      complexed with so4
  2. Domain(s) for 1qy9:
    1. 2164621Domain d1qy9a1: 1qy9 A:3-129 [104645]
      Structural genomics target
      complexed with gol, oh
    2. 2164622Domain d1qy9a2: 1qy9 A:130-297 [104646]
      Structural genomics target
      complexed with gol, oh
    3. 2164623Domain d1qy9b1: 1qy9 B:3-129 [104647]
      Structural genomics target
      complexed with gol, oh
    4. 2164624Domain d1qy9b2: 1qy9 B:130-297 [104648]
      Structural genomics target
      complexed with gol, oh
    5. 2164625Domain d1qy9c1: 1qy9 C:2-129 [104649]
      Structural genomics target
      complexed with gol, oh
    6. 2164626Domain d1qy9c2: 1qy9 C:130-297 [104650]
      Structural genomics target
      complexed with gol, oh
    7. 2164627Domain d1qy9d1: 1qy9 D:1-129 [104651]
      Structural genomics target
      complexed with gol, oh
    8. 2164628Domain d1qy9d2: 1qy9 D:130-297 [104652]
      Structural genomics target
      complexed with gol, oh
  3. Domain(s) for 1qya:
    1. 2164629Domain d1qyaa1: 1qya A:2-129 [104653]
      Other proteins in same PDB: d1qyaa3, d1qyab3
      Structural genomics target
    2. 2164630Domain d1qyaa2: 1qya A:130-297 [104654]
      Other proteins in same PDB: d1qyaa3, d1qyab3
      Structural genomics target
    3. 2164631Domain d1qyab1: 1qya B:2-129 [104655]
      Other proteins in same PDB: d1qyaa3, d1qyab3
      Structural genomics target
    4. 2164632Domain d1qyab2: 1qya B:130-297 [104656]
      Other proteins in same PDB: d1qyaa3, d1qyab3
      Structural genomics target
  4. Domain(s) for 1sdj:
    1. 2164635Domain d1sdja1: 1sdj A:1-129 [98807]
      Other proteins in same PDB: d1sdja3, d1sdja4
      structural genomics; NESG target ET25
      complexed with so4
    2. 2164636Domain d1sdja2: 1sdj A:130-297 [98808]
      Other proteins in same PDB: d1sdja3, d1sdja4
      structural genomics; NESG target ET25
      complexed with so4

More info for Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE

Timeline for Species Escherichia coli [TaxId:562] from d.21.1.2 Hypothetical protein YddE: