Lineage for Protein: Xylanase A, catalytic core

  1. Root: SCOP 1.65
  2. 305035Class c: Alpha and beta proteins (a/b) [51349] (121 folds)
  3. 305036Fold c.1: TIM beta/alpha-barrel [51350] (26 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 305661Superfamily c.1.8: (Trans)glycosidases [51445] (9 families) (S)
  5. 305956Family c.1.8.3: beta-glycanases [51487] (16 proteins)
    consist of a number of sequence families
  6. 306194Protein Xylanase A, catalytic core [51514] (6 species)

Species:

  1. 306195Cellulomonas fimi [TaxId:1708] [51520] (9 PDB entries)
    synonym: beta-1,4-glycanase Cex
    1. Domain for 1exp:
    2. Domain for 1fh7:
    3. Domain for 1fh8:
    4. Domain for 1fh9:
    5. Domain for 1fhd:
    6. Domain for 1j01:
    7. Domain for 2exo:
    8. Domain for 2his:
    9. Domain for 2xyl:
  2. 306205Penicillium simplicissimum [TaxId:69488] [51516] (7 PDB entries)
    1. Domain for 1b30:
    2. Domain for 1b31:
    3. Domain for 1b3v:
    4. Domain for 1b3w:
    5. Domain for 1b3x:
    6. Domain for 1b3y:
    7. Domain for 1b3z:
  3. 306213Pseudomonas fluorescens [TaxId:294] [51517] (3 PDB entries)
    1. Domains for 1clx:
      1. 306214Domain d1clxa_: 1clx A: [28899]
      2. 306215Domain d1clxb_: 1clx B: [28900]
      3. 306216Domain d1clxc_: 1clx C: [28901]
      4. 306217Domain d1clxd_: 1clx D: [28902]
        complexed with ca
    2. Domains for 1e5n:
      1. 306218Domain d1e5na_: 1e5n A: [28904]
      2. 306219Domain d1e5nb_: 1e5n B: [28905]
        complexed with ca, xys; mutant
    3. Domain for 1xys:
  4. 306221Streptomyces lividans [TaxId:1916] [51515] (5 PDB entries)
    1. Domain for 1e0v:
    2. Domain for 1e0w:
    3. Domains for 1e0x:
      1. 306224Domain d1e0xa_: 1e0x A: [59151]
      2. 306225Domain d1e0xb_: 1e0x B: [59152]
        complexed with gol, x2f, xys
    4. Domain for 1od8:
    5. Domain for 1xas:
  5. 306228Streptomyces olivaceoviridis [TaxId:1921] [51519] (7 PDB entries)
    N-terminal domain; fused with a ricin A-like beta-trefoil domain
    1. Domains for 1isv:
      1. 306235Domain d1isva2: 1isv A:1-303 [66342]
        Other proteins in same PDB: d1isva1, d1isvb1
      2. 306236Domain d1isvb2: 1isv B:501-803 [66344]
        Other proteins in same PDB: d1isva1, d1isvb1
        complexed with xys
    2. Domains for 1isw:
      1. 306237Domain d1iswa2: 1isw A:1-303 [66346]
        Other proteins in same PDB: d1iswa1, d1iswb1
      2. 306238Domain d1iswb2: 1isw B:501-803 [66348]
        Other proteins in same PDB: d1iswa1, d1iswb1
        complexed with xys
    3. Domains for 1isx:
      1. 306239Domain d1isxa2: 1isx A:1-303 [66350]
        Other proteins in same PDB: d1isxa1, d1isxb1
      2. 306240Domain d1isxb2: 1isx B:501-803 [66352]
        Other proteins in same PDB: d1isxa1, d1isxb1
        complexed with xys
    4. Domains for 1isy:
      1. 306241Domain d1isya2: 1isy A:1-303 [66354]
        Other proteins in same PDB: d1isya1, d1isyb1
      2. 306242Domain d1isyb2: 1isy B:501-803 [66356]
        Other proteins in same PDB: d1isya1, d1isyb1
        complexed with glc
    5. Domains for 1isz:
      1. 306231Domain d1isza2: 1isz A:1-303 [66358]
        Other proteins in same PDB: d1isza1, d1iszb1
      2. 306232Domain d1iszb2: 1isz B:501-803 [66360]
        Other proteins in same PDB: d1isza1, d1iszb1
        complexed with gal
    6. Domains for 1it0:
      1. 306233Domain d1it0a2: 1it0 A:1-303 [66362]
        Other proteins in same PDB: d1it0a1, d1it0b1
      2. 306234Domain d1it0b2: 1it0 B:501-803 [66364]
        Other proteins in same PDB: d1it0a1, d1it0b1
        complexed with lat
    7. Domains for 1xyf:
      1. 306229Domain d1xyfa2: 1xyf A:1-303 [28909]
        Other proteins in same PDB: d1xyfa1, d1xyfb1
      2. 306230Domain d1xyfb2: 1xyf B:501-803 [28910]
        Other proteins in same PDB: d1xyfa1, d1xyfb1
  6. 306243Thermoascus aurantiacus [TaxId:5087] [51518] (9 PDB entries)
    1. Domain for 1gok:
    2. Domain for 1gom:
    3. Domain for 1goo:
    4. Domain for 1goq:
    5. Domain for 1gor:
    6. Domain for 1i1w:
      • 306244Domain d1i1wa_: 1i1w A: [76732]
        ultra high resolution structure
        complexed with acn, eoh, gol, pca, unx
    7. Domain for 1i1x:
    8. Domain for 1k6a:
    9. Domain for 1tux:
      • 306249Domain d1tux__: 1tux - [28907]
        X-ray determined sequence differs from that in other entries

More info for Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases

Timeline for Protein Xylanase A, catalytic core from c.1.8.3: beta-glycanases: