SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.18: E set domains [81296] (27 families)
"Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
Family b.1.18.11: Arrestin/Vps26-like [81291] (2 proteins)
Protein automated matches [227018] (1 species)
not a true protein

Species:

Cow (Bos taurus) [TaxId:9913] [225765] (5 PDB entries)
1. Domain for 2wtr:
  - Domain d2wtrb1: 2wtr B:2-175 [231495]
    Other proteins in same PDB: d2wtra1, d2wtra2, d2wtrb2
    automated match to d1g4ma1
    complexed with ba
2. Domains for 3ugu:
  1. Domain d3ugua1: 3ugu A:10-182 [217370]
    automated match to d1cf1b1
  2. Domain d3ugua2: 3ugu A:183-360 [217371]
    automated match to d1cf1b2
3. Domains for 3ugx:
  1. Domain d3ugxa1: 3ugx A:9-182 [217372]
    automated match to d1cf1b1
    complexed with edo, imd, k, na, ptd
  2. Domain d3ugxa2: 3ugx A:183-386 [217373]
    automated match to d1cf1b2
    complexed with edo, imd, k, na, ptd
  3. Domain d3ugxb1: 3ugx B:11-182 [217374]
    automated match to d1cf1b1
    complexed with edo, imd, k, na, ptd
  4. Domain d3ugxb2: 3ugx B:183-385 [217375]
    automated match to d1cf1b2
    complexed with edo, imd, k, na, ptd
  5. Domain d3ugxc1: 3ugx C:9-182 [217376]
    automated match to d1cf1b1
    complexed with edo, imd, k, na, ptd
  6. Domain d3ugxc2: 3ugx C:183-386 [217377]
    automated match to d1cf1b2
    complexed with edo, imd, k, na, ptd
  7. Domain d3ugxd1: 3ugx D:9-182 [217378]
    automated match to d1cf1b1
    complexed with edo, imd, k, na, ptd
  8. Domain d3ugxd2: 3ugx D:183-385 [217379]
    automated match to d1cf1b2
    complexed with edo, imd, k, na, ptd
4. Domains for 4j2q:
  1. Domain d4j2qa1: 4j2q A:10-182 [252808]
    automated match to d1ayra1
  2. Domain d4j2qa2: 4j2q A:183-360 [252809]
    automated match to d1ayra2
  3. Domain d4j2qb1: 4j2q B:10-182 [252810]
    automated match to d1ayra1
  4. Domain d4j2qb2: 4j2q B:183-360 [252811]
    automated match to d1ayra2
5. Domain for 4zrg:
  - Domain d4zrga1: 4zrg A:11-182 [279401]
    automated match to d1cf1a1
    complexed with co2; mutant

More info for Protein automated matches from b.1.18.11: Arrestin/Vps26-like

Timeline for Protein automated matches from b.1.18.11: Arrestin/Vps26-like:

Protein automated matches from b.1.18.11: Arrestin/Vps26-like first appeared in SCOPe 2.03
Protein automated matches from b.1.18.11: Arrestin/Vps26-like appears in SCOPe 2.07