Lineage for Superfamily b.1.18: E set domains

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2032114Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies

Families:

  1. 2032115b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain [81279] (8 protein domains)
    subgroup of the larger IPT/TIG domain family
  2. 2032237b.1.18.2: E-set domains of sugar-utilizing enzymes [81282] (20 protein domains)
    domains of unknown function associated with different type of catalytic domains in a different sequential location
    subgroup of the larger IPT/TIG domain family
  3. 2032482b.1.18.3: Arthropod hemocyanin, C-terminal domain [81283] (1 protein)
    automatically mapped to Pfam PF03723
  4. 2032497b.1.18.4: Class II viral fusion proteins C-terminal domain [81284] (3 protein domains)
  5. 2032559b.1.18.5: Cytomegalovirus protein US2 [81285] (1 protein)
    automatically mapped to Pfam PF05963
  6. 2032566b.1.18.6: Molybdenum-containing oxidoreductases-like dimerisation domain [81286] (1 protein)
    automatically mapped to Pfam PF03404
  7. 2032586b.1.18.7: ML domain [81287] (3 protein domains)
    implicated in lipid recognition, particularly in the recognition of pathogen related products
    automatically mapped to Pfam PF02221
  8. 2032608b.1.18.8: RhoGDI-like [81288] (3 protein domains)
  9. 2032683b.1.18.9: Transglutaminase N-terminal domain [81289] (1 protein)
  10. 2032738b.1.18.10: Filamin repeat (rod domain) [81290] (5 protein domains)
    Pfam PF00630
  11. 2032796b.1.18.11: Arrestin/Vps26-like [81291] (2 protein domains)
  12. 2032850b.1.18.12: Gingipain R (RgpB), C-terminal domain [81292] (1 protein)
    automatically mapped to Pfam PF03785
  13. 2032854b.1.18.13: Cellulosomal scaffoldin protein CipC, module x2.1 [81293] (1 protein)
    automatically mapped to Pfam PF03442
  14. 2032858b.1.18.14: Quinohemoprotein amine dehydrogenase A chain, domains 4 and 5 [81294] (1 protein)
  15. 2032870b.1.18.15: Internalin Ig-like domain [81295] (3 protein domains)
    truncated fold fused to an LRR domain
  16. 2032891b.1.18.16: Cytoplasmic domain of inward rectifier potassium channel [81966] (4 protein domains)
  17. 2032932b.1.18.17: Copper resistance protein C (CopC, PcoC) [81969] (1 protein)
    automatically mapped to Pfam PF04234
    automatically mapped to Pfam PF13205
  18. 2032949b.1.18.18: Other IPT/TIG domains [89191] (1 protein)
    apart from the domains of transcription factors and sugar-utilizing enzymes
    automatically mapped to Pfam PF01833
  19. 2032955b.1.18.19: SoxZ-like [141027] (1 protein)
    automatically mapped to Pfam PF08770
  20. 2032960b.1.18.20: Enterochelin esterase N-terminal domain-like [141030] (1 protein)
    PfamB PB013071
    automatically mapped to Pfam PF11806
  21. 2032974b.1.18.21: AMPK-beta glycogen binding domain-like [158886] (4 protein domains)
    lacks the N-terminal strand (A) and contains a beta-hairpin insertion in the C-terminal strand (G)
  22. 2033022b.1.18.22: Sec63 C-terminal domain-like [158893] (1 protein)
    C-terminal part of Pfam PF02889
  23. 2033026b.1.18.23: SVA-like [158896] (1 protein)
    Pfam PF05326
  24. 2033030b.1.18.0: automated matches [191341] (1 protein)
    not a true family

More info for Superfamily b.1.18: E set domains

Timeline for Superfamily b.1.18: E set domains: