SCOPe 2.08: Family b.1.18.4: Class II viral fusion proteins C-terminal domain

Lineage for Family b.1.18.4: Class II viral fusion proteins C-terminal domain

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.18: E set domains [81296] (27 families)
   "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies

5. Family b.1.18.4: Class II viral fusion proteins C-terminal domain [81284] (3 proteins)

Proteins:

1. Envelope glycoprotein [49213] (5 species)

   1. Species Dengue virus type 2 [TaxId:11060] [89194] (10 PDB entries)
      Uniprot P12823 281-675 # 99% sequence identity

   2. Species Japanese encephalitis virus [TaxId:11072] [101527] (1 PDB entry)

   3. Species Langat virus [TaxId:11085] [141022] (1 PDB entry)
      Uniprot P29838 583-765

   4. Species Tick-borne encephalitis virus [TaxId:11084] [49214] (2 PDB entries)

   5. Species West Nile virus [TaxId:11082] [110056] (1 PDB entry)
      Uniprot Q8JU42 586-696

2. Fusion glycoprotein E1 [74840] (1 species)

   • Species Semliki forest virus [TaxId:11033] [74841] (3 PDB entries)

3. automated matches [190183] (10 species)
   not a true protein

   1. Species Dengue virus 1 [TaxId:11053] [195098] (4 PDB entries)

   2. Species Dengue virus 2 [TaxId:11060] [359240] (2 PDB entries)

   3. Species Dengue virus 2 [TaxId:11064] [195986] (1 PDB entry)

   4. Species Dengue virus 3 [TaxId:11069] [195240] (2 PDB entries)

   5. Species Dengue virus [TaxId:12637] [195242] (1 PDB entry)

   6. Species Usutu virus [TaxId:64286] [391462] (4 PDB entries)

   7. Species West Nile virus [TaxId:11082] [186921] (3 PDB entries)

   8. Species Zika virus (strain mr 766) [TaxId:64320] [339905] (1 PDB entry)

   9. Species Zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013 [TaxId:2043570] [377146] (2 PDB entries)

   10. Species Zika virus [TaxId:64320] [320471] (7 PDB entries)

More info for Family b.1.18.4: Class II viral fusion proteins C-terminal domain

Timeline for Family b.1.18.4: Class II viral fusion proteins C-terminal domain:

• Family b.1.18.4: Class II viral fusion proteins C-terminal domain first appeared in SCOP 1.63
  
• Family b.1.18.4: Class II viral fusion proteins C-terminal domain appears in SCOPe 2.07