Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2352459Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2375023Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2375767Family b.1.18.11: Arrestin/Vps26-like [81291] (2 proteins)
  6. 2375803Protein automated matches [227018] (2 species)
    not a true protein

Species:

  1. 2375804Cow (Bos taurus) [TaxId:9913] [225765] (5 PDB entries)
    1. Domain for 2wtr:
    2. Domains for 3ugu:
      1. 2375805Domain d3ugua1: 3ugu A:10-182 [217370]
        automated match to d1cf1b1
      2. 2375806Domain d3ugua2: 3ugu A:183-360 [217371]
        automated match to d1cf1b2
    3. Domains for 3ugx:
      1. 2375812Domain d3ugxa1: 3ugx A:9-182 [217372]
        automated match to d1cf1b1
        complexed with edo, imd, k, na, ptd
      2. 2375813Domain d3ugxa2: 3ugx A:183-386 [217373]
        automated match to d1cf1b2
        complexed with edo, imd, k, na, ptd
      3. 2375814Domain d3ugxb1: 3ugx B:11-182 [217374]
        automated match to d1cf1b1
        complexed with edo, imd, k, na, ptd
      4. 2375815Domain d3ugxb2: 3ugx B:183-385 [217375]
        automated match to d1cf1b2
        complexed with edo, imd, k, na, ptd
      5. 2375816Domain d3ugxc1: 3ugx C:9-182 [217376]
        automated match to d1cf1b1
        complexed with edo, imd, k, na, ptd
      6. 2375817Domain d3ugxc2: 3ugx C:183-386 [217377]
        automated match to d1cf1b2
        complexed with edo, imd, k, na, ptd
      7. 2375818Domain d3ugxd1: 3ugx D:9-182 [217378]
        automated match to d1cf1b1
        complexed with edo, imd, k, na, ptd
      8. 2375819Domain d3ugxd2: 3ugx D:183-385 [217379]
        automated match to d1cf1b2
        complexed with edo, imd, k, na, ptd
    4. Domains for 4j2q:
      1. 2375808Domain d4j2qa1: 4j2q A:10-182 [252808]
        automated match to d1ayra1
      2. 2375809Domain d4j2qa2: 4j2q A:183-360 [252809]
        automated match to d1ayra2
      3. 2375810Domain d4j2qb1: 4j2q B:10-182 [252810]
        automated match to d1ayra1
      4. 2375811Domain d4j2qb2: 4j2q B:183-360 [252811]
        automated match to d1ayra2
    5. Domain for 4zrg:
  2. 2375821Rattus norvegicus [TaxId:10116] [379466] (1 PDB entry)

More info for Protein automated matches from b.1.18.11: Arrestin/Vps26-like

Timeline for Protein automated matches from b.1.18.11: Arrestin/Vps26-like: