Lineage for Species: Vibrio vulnificus [TaxId: 216895]

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1620378Fold c.78: ATC-like [53670] (2 superfamilies)
    consists of two similar domains related by pseudo dyad; duplication
    core: 3 layers, a/b/a, parallel beta-sheet of 4 strands, order 2134
  4. 1620379Superfamily c.78.1: Aspartate/ornithine carbamoyltransferase [53671] (2 families) (S)
  5. 1620829Family c.78.1.0: automated matches [227206] (1 protein)
    not a true family
  6. 1620830Protein automated matches [226938] (22 species)
    not a true protein
  7. 1621003Species Vibrio vulnificus [TaxId:216895] [226484] (6 PDB entries)

PDB entries in Species: Vibrio vulnificus [TaxId: 216895]:

  1. Domain(s) for 3upd:
    1. 1621034Domain d3upda1: 3upd A:-22-152 [233801]
      automated match to d4jfrb1
    2. 1621035Domain d3upda2: 3upd A:153-334 [233802]
      automated match to d4jfrb2
  2. Domain(s) for 4h31:
    1. 1621004Domain d4h31a1: 4h31 A:-1-152 [222349]
      automated match to d1duvg1
      complexed with cl, cp, nva, pe5, peg
    2. 1621005Domain d4h31a2: 4h31 A:153-333 [222350]
      automated match to d1duvg2
      complexed with cl, cp, nva, pe5, peg
    3. 1621006Domain d4h31b1: 4h31 B:1-152 [222351]
      automated match to d1duvg1
      complexed with cl, cp, nva, pe5, peg
    4. 1621007Domain d4h31b2: 4h31 B:153-333 [222352]
      automated match to d1duvg2
      complexed with cl, cp, nva, pe5, peg
    5. 1621008Domain d4h31c1: 4h31 C:1-152 [222353]
      automated match to d1duvg1
      complexed with cl, cp, nva, pe5, peg
    6. 1621009Domain d4h31c2: 4h31 C:153-334 [222354]
      automated match to d1duvg2
      complexed with cl, cp, nva, pe5, peg
  3. Domain(s) for 4jfr:
    1. 1621028Domain d4jfra1: 4jfr A:-1-152 [223790]
      automated match to d1duvg1
      complexed with cl, cp, mg
    2. 1621029Domain d4jfra2: 4jfr A:153-334 [223791]
      automated match to d1duvg2
      complexed with cl, cp, mg
    3. 1621030Domain d4jfrb1: 4jfr B:-5-152 [223792]
      automated match to d1duvg1
      complexed with cl, cp, mg
    4. 1621031Domain d4jfrb2: 4jfr B:153-334 [223793]
      automated match to d1duvg2
      complexed with cl, cp, mg
    5. 1621032Domain d4jfrc1: 4jfr C:1-152 [223794]
      automated match to d1duvg1
      complexed with cl, cp, mg
    6. 1621033Domain d4jfrc2: 4jfr C:153-334 [223795]
      automated match to d1duvg2
      complexed with cl, cp, mg
  4. Domain(s) for 4jhx:
    1. 1621010Domain d4jhxa1: 4jhx A:-1-152 [223827]
      automated match to d1duvg1
      complexed with arg, cl, cp, peg
    2. 1621011Domain d4jhxa2: 4jhx A:153-334 [223828]
      automated match to d1duvg2
      complexed with arg, cl, cp, peg
    3. 1621012Domain d4jhxb1: 4jhx B:3-152 [223829]
      automated match to d1duvg1
      complexed with arg, cl, cp, peg
    4. 1621013Domain d4jhxb2: 4jhx B:153-334 [223830]
      automated match to d1duvg2
      complexed with arg, cl, cp, peg
    5. 1621014Domain d4jhxc1: 4jhx C:3-152 [223831]
      automated match to d1duvg1
      complexed with arg, cl, cp, peg
    6. 1621015Domain d4jhxc2: 4jhx C:153-334 [223832]
      automated match to d1duvg2
      complexed with arg, cl, cp, peg
  5. Domain(s) for 4jqo:
    1. 1621022Domain d4jqoa1: 4jqo A:-3-152 [223942]
      automated match to d1duvg1
      complexed with cir, cl, peg, po4
    2. 1621023Domain d4jqoa2: 4jqo A:153-334 [223943]
      automated match to d1duvg2
      complexed with cir, cl, peg, po4
    3. 1621024Domain d4jqob1: 4jqo B:-5-152 [223944]
      automated match to d1duvg1
      complexed with cir, cl, peg, po4
    4. 1621025Domain d4jqob2: 4jqo B:153-334 [223945]
      automated match to d1duvg2
      complexed with cir, cl, peg, po4
    5. 1621026Domain d4jqoc1: 4jqo C:1-152 [223946]
      automated match to d1duvg1
      complexed with cir, cl, peg, po4
    6. 1621027Domain d4jqoc2: 4jqo C:153-334 [223947]
      automated match to d1duvg2
      complexed with cir, cl, peg, po4
  6. Domain(s) for 4kwt:
    1. 1621016Domain d4kwta1: 4kwt A:0-152 [224513]
      automated match to d1duvg1
      complexed with cl, peg
    2. 1621017Domain d4kwta2: 4kwt A:153-334 [224514]
      automated match to d1duvg2
      complexed with cl, peg
    3. 1621018Domain d4kwtb1: 4kwt B:0-152 [224515]
      automated match to d1duvg1
      complexed with cl, peg
    4. 1621019Domain d4kwtb2: 4kwt B:153-334 [224516]
      automated match to d1duvg2
      complexed with cl, peg
    5. 1621020Domain d4kwtc1: 4kwt C:1-152 [224517]
      automated match to d1duvg1
      complexed with cl, peg
    6. 1621021Domain d4kwtc2: 4kwt C:153-334 [224518]
      automated match to d1duvg2
      complexed with cl, peg

More info for Species Vibrio vulnificus [TaxId:216895] from c.78.1.0 automated matches

Timeline for Species Vibrio vulnificus [TaxId:216895] from c.78.1.0 automated matches: