PDB entry 4jqo

View 4jqo on RCSB PDB site
Description: Crystal structure of anabolic ornithine carbamoyltransferase from Vibrio vulnificus in complex with citrulline and inorganic phosphate
Class: transferase
Keywords: Structural Genomics, NIAID, National Institute of Allergy and Infectious Diseases, Center for Structural Genomics of Infectious Diseases, CSGID, Transferase, carbamoyl phosphate, L-ornithine
Deposited on 2013-03-20, released 2013-04-17
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-04-17, with a file datestamp of 2013-04-12.
Experiment type: XRAY
Resolution: 2.08 Å
R-factor: 0.163
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ornithine carbamoyltransferase
    Species: Vibrio vulnificus CMCP6 [TaxId:216895]
    Gene: argF, VV1_1466
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DCF5 (24-357)
      • expression tag (20-23)
    Domains in SCOPe 2.04: d4jqoa1, d4jqoa2
  • Chain 'B':
    Compound: ornithine carbamoyltransferase
    Species: Vibrio vulnificus CMCP6 [TaxId:216895]
    Gene: argF, VV1_1466
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DCF5 (24-357)
      • expression tag (18-23)
    Domains in SCOPe 2.04: d4jqob1, d4jqob2
  • Chain 'C':
    Compound: ornithine carbamoyltransferase
    Species: Vibrio vulnificus CMCP6 [TaxId:216895]
    Gene: argF, VV1_1466
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d4jqoc1, d4jqoc2
  • Heterogens: PO4, CIR, CL, PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4jqoA (A:)
mhhhhhhssgvdlgtenlyfqsnamafnlrnrnflklldfstkeiqflidlsadlkkaky
agteqkkllgknialifekastrtrcafevaafdqgaqvtyigpsgsqigdkesmkdtar
vlgrmydgiqyrgfgqaiveelgafagvpvwngltdefhptqiladfltmlehsqgkala
diqfaylgdarnnvgnslmvgaakmgmdirlvgpqaywpdeelvaacqaiakqtggkitl
tenvaegvqgcdflytdvwvsmgespeawdervalmkpyqvnmnvlkqtgnpnvkfmhcl
pafhndettigkqvadkfgmkglevteevfesehsivfdeaenrmhtikavmvatlgs

    Sequence, based on observed residues (ATOM records): (download) 
    >4jqoA (A:)
qsnamafnlrnrnflklldfstkeiqflidlsadlkkakyagteqkkllgknialifeka
strtrcafevaafdqgaqvtyigpsgsqigdkesmkdtarvlgrmydgiqyrgfgqaive
elgafagvpvwngltdefhptqiladfltmlehsqgkaladiqfaylgdarnnvgnslmv
gaakmgmdirlvgpqaywpdeelvaacqaiakqtggkitltenvaegvqgcdflytdvwv
smgespeawdervalmkpyqvnmnvlkqtgnpnvkfmhclpafhndettigkqvadkfgm
kglevteevfesehsivfdeaenrmhtikavmvatlgs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4jqoB (B:)
mhhhhhhssgvdlgtenlyfqsnamafnlrnrnflklldfstkeiqflidlsadlkkaky
agteqkkllgknialifekastrtrcafevaafdqgaqvtyigpsgsqigdkesmkdtar
vlgrmydgiqyrgfgqaiveelgafagvpvwngltdefhptqiladfltmlehsqgkala
diqfaylgdarnnvgnslmvgaakmgmdirlvgpqaywpdeelvaacqaiakqtggkitl
tenvaegvqgcdflytdvwvsmgespeawdervalmkpyqvnmnvlkqtgnpnvkfmhcl
pafhndettigkqvadkfgmkglevteevfesehsivfdeaenrmhtikavmvatlgs

    Sequence, based on observed residues (ATOM records): (download) 
    >4jqoB (B:)
yfqsnamafnlrnrnflklldfstkeiqflidlsadlkkakyagteqkkllgknialife
kastrtrcafevaafdqgaqvtyigpsgsqigdkesmkdtarvlgrmydgiqyrgfgqai
veelgafagvpvwngltdefhptqiladfltmlehsqgkaladiqfaylgdarnnvgnsl
mvgaakmgmdirlvgpqaywpdeelvaacqaiakqtggkitltenvaegvqgcdflytdv
wvsmgespeawdervalmkpyqvnmnvlkqtgnpnvkfmhclpafhndettigkqvadkf
gmkglevteevfesehsivfdeaenrmhtikavmvatlgs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4jqoC (C:)
mhhhhhhssgvdlgtenlyfqsnamafnlrnrnflklldfstkeiqflidlsadlkkaky
agteqkkllgknialifekastrtrcafevaafdqgaqvtyigpsgsqigdkesmkdtar
vlgrmydgiqyrgfgqaiveelgafagvpvwngltdefhptqiladfltmlehsqgkala
diqfaylgdarnnvgnslmvgaakmgmdirlvgpqaywpdeelvaacqaiakqtggkitl
tenvaegvqgcdflytdvwvsmgespeawdervalmkpyqvnmnvlkqtgnpnvkfmhcl
pafhndettigkqvadkfgmkglevteevfesehsivfdeaenrmhtikavmvatlgs

    Sequence, based on observed residues (ATOM records): (download) 
    >4jqoC (C:)
mafnlrnrnflklldfstkeiqflidlsadlkkakyagteqkkllgknialifekastrt
rcafevaafdqgaqvtyigpsgsqigdkesmkdtarvlgrmydgiqyrgfgqaiveelga
fagvpvwngltdefhptqiladfltmlehsqgkaladiqfaylgdarnnvgnslmvgaak
mgmdirlvgpqaywpdeelvaacqaiakqtggkitltenvaegvqgcdflytdvwvsmge
speawdervalmkpyqvnmnvlkqtgnpnvkfmhclpafhndettigkqvadkfgmkgle
vteevfesehsivfdeaenrmhtikavmvatlgs