Lineage for Species: Vibrio vulnificus [TaxId: 216895]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2139045Fold c.78: ATC-like [53670] (2 superfamilies)
    consists of two similar domains related by pseudo dyad; duplication
    core: 3 layers, a/b/a, parallel beta-sheet of 4 strands, order 2134
  4. 2139046Superfamily c.78.1: Aspartate/ornithine carbamoyltransferase [53671] (2 families) (S)
  5. 2139496Family c.78.1.0: automated matches [227206] (1 protein)
    not a true family
  6. 2139497Protein automated matches [226938] (22 species)
    not a true protein
  7. 2139670Species Vibrio vulnificus [TaxId:216895] [226484] (6 PDB entries)

PDB entries in Species: Vibrio vulnificus [TaxId: 216895]:

  1. Domain(s) for 3upd:
    1. 2139701Domain d3upda1: 3upd A:-5-152 [233801]
      Other proteins in same PDB: d3upda3
      automated match to d4jfrb1
    2. 2139702Domain d3upda2: 3upd A:153-334 [233802]
      Other proteins in same PDB: d3upda3
      automated match to d4jfrb2
  2. Domain(s) for 4h31:
    1. 2139671Domain d4h31a1: 4h31 A:1-152 [222349]
      Other proteins in same PDB: d4h31a3
      automated match to d1duvg1
      complexed with cl, cp, nva, pe5, peg
    2. 2139672Domain d4h31a2: 4h31 A:153-333 [222350]
      Other proteins in same PDB: d4h31a3
      automated match to d1duvg2
      complexed with cl, cp, nva, pe5, peg
    3. 2139673Domain d4h31b1: 4h31 B:1-152 [222351]
      Other proteins in same PDB: d4h31a3
      automated match to d1duvg1
      complexed with cl, cp, nva, pe5, peg
    4. 2139674Domain d4h31b2: 4h31 B:153-333 [222352]
      Other proteins in same PDB: d4h31a3
      automated match to d1duvg2
      complexed with cl, cp, nva, pe5, peg
    5. 2139675Domain d4h31c1: 4h31 C:1-152 [222353]
      Other proteins in same PDB: d4h31a3
      automated match to d1duvg1
      complexed with cl, cp, nva, pe5, peg
    6. 2139676Domain d4h31c2: 4h31 C:153-334 [222354]
      Other proteins in same PDB: d4h31a3
      automated match to d1duvg2
      complexed with cl, cp, nva, pe5, peg
  3. Domain(s) for 4jfr:
    1. 2139695Domain d4jfra1: 4jfr A:1-152 [223790]
      Other proteins in same PDB: d4jfra3, d4jfrb3
      automated match to d1duvg1
      complexed with cl, cp, mg
    2. 2139696Domain d4jfra2: 4jfr A:153-334 [223791]
      Other proteins in same PDB: d4jfra3, d4jfrb3
      automated match to d1duvg2
      complexed with cl, cp, mg
    3. 2139697Domain d4jfrb1: 4jfr B:1-152 [223792]
      Other proteins in same PDB: d4jfra3, d4jfrb3
      automated match to d1duvg1
      complexed with cl, cp, mg
    4. 2139698Domain d4jfrb2: 4jfr B:153-334 [223793]
      Other proteins in same PDB: d4jfra3, d4jfrb3
      automated match to d1duvg2
      complexed with cl, cp, mg
    5. 2139699Domain d4jfrc1: 4jfr C:1-152 [223794]
      Other proteins in same PDB: d4jfra3, d4jfrb3
      automated match to d1duvg1
      complexed with cl, cp, mg
    6. 2139700Domain d4jfrc2: 4jfr C:153-334 [223795]
      Other proteins in same PDB: d4jfra3, d4jfrb3
      automated match to d1duvg2
      complexed with cl, cp, mg
  4. Domain(s) for 4jhx:
    1. 2139677Domain d4jhxa1: 4jhx A:1-152 [223827]
      Other proteins in same PDB: d4jhxa3
      automated match to d1duvg1
      complexed with arg, cl, cp, peg
    2. 2139678Domain d4jhxa2: 4jhx A:153-334 [223828]
      Other proteins in same PDB: d4jhxa3
      automated match to d1duvg2
      complexed with arg, cl, cp, peg
    3. 2139679Domain d4jhxb1: 4jhx B:3-152 [223829]
      Other proteins in same PDB: d4jhxa3
      automated match to d1duvg1
      complexed with arg, cl, cp, peg
    4. 2139680Domain d4jhxb2: 4jhx B:153-334 [223830]
      Other proteins in same PDB: d4jhxa3
      automated match to d1duvg2
      complexed with arg, cl, cp, peg
    5. 2139681Domain d4jhxc1: 4jhx C:3-152 [223831]
      Other proteins in same PDB: d4jhxa3
      automated match to d1duvg1
      complexed with arg, cl, cp, peg
    6. 2139682Domain d4jhxc2: 4jhx C:153-334 [223832]
      Other proteins in same PDB: d4jhxa3
      automated match to d1duvg2
      complexed with arg, cl, cp, peg
  5. Domain(s) for 4jqo:
    1. 2139689Domain d4jqoa1: 4jqo A:1-152 [223942]
      Other proteins in same PDB: d4jqoa3, d4jqob3
      automated match to d1duvg1
      complexed with cir, cl, peg, po4
    2. 2139690Domain d4jqoa2: 4jqo A:153-334 [223943]
      Other proteins in same PDB: d4jqoa3, d4jqob3
      automated match to d1duvg2
      complexed with cir, cl, peg, po4
    3. 2139691Domain d4jqob1: 4jqo B:1-152 [223944]
      Other proteins in same PDB: d4jqoa3, d4jqob3
      automated match to d1duvg1
      complexed with cir, cl, peg, po4
    4. 2139692Domain d4jqob2: 4jqo B:153-334 [223945]
      Other proteins in same PDB: d4jqoa3, d4jqob3
      automated match to d1duvg2
      complexed with cir, cl, peg, po4
    5. 2139693Domain d4jqoc1: 4jqo C:1-152 [223946]
      Other proteins in same PDB: d4jqoa3, d4jqob3
      automated match to d1duvg1
      complexed with cir, cl, peg, po4
    6. 2139694Domain d4jqoc2: 4jqo C:153-334 [223947]
      Other proteins in same PDB: d4jqoa3, d4jqob3
      automated match to d1duvg2
      complexed with cir, cl, peg, po4
  6. Domain(s) for 4kwt:
    1. 2139683Domain d4kwta1: 4kwt A:1-152 [224513]
      Other proteins in same PDB: d4kwta3, d4kwtb3
      automated match to d1duvg1
      complexed with cl, peg
    2. 2139684Domain d4kwta2: 4kwt A:153-334 [224514]
      Other proteins in same PDB: d4kwta3, d4kwtb3
      automated match to d1duvg2
      complexed with cl, peg
    3. 2139685Domain d4kwtb1: 4kwt B:1-152 [224515]
      Other proteins in same PDB: d4kwta3, d4kwtb3
      automated match to d1duvg1
      complexed with cl, peg
    4. 2139686Domain d4kwtb2: 4kwt B:153-334 [224516]
      Other proteins in same PDB: d4kwta3, d4kwtb3
      automated match to d1duvg2
      complexed with cl, peg
    5. 2139687Domain d4kwtc1: 4kwt C:1-152 [224517]
      Other proteins in same PDB: d4kwta3, d4kwtb3
      automated match to d1duvg1
      complexed with cl, peg
    6. 2139688Domain d4kwtc2: 4kwt C:153-334 [224518]
      Other proteins in same PDB: d4kwta3, d4kwtb3
      automated match to d1duvg2
      complexed with cl, peg

More info for Species Vibrio vulnificus [TaxId:216895] from c.78.1.0 automated matches

Timeline for Species Vibrio vulnificus [TaxId:216895] from c.78.1.0 automated matches: