SCOPe 2.08: Species: Vibrio vulnificus [TaxId: 216895]

Lineage for Species: Vibrio vulnificus [TaxId: 216895]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.78: ATC-like [53670] (2 superfamilies)
consists of two similar domains related by pseudo dyad; duplication
core: 3 layers, a/b/a, parallel beta-sheet of 4 strands, order 2134
Superfamily c.78.1: Aspartate/ornithine carbamoyltransferase [53671] (2 families)
Family c.78.1.0: automated matches [227206] (1 protein)
not a true family
Protein automated matches [226938] (26 species)
not a true protein
Species Vibrio vulnificus [TaxId:216895] [226484] (6 PDB entries)

PDB entries in Species: Vibrio vulnificus [TaxId: 216895]:

Domain(s) for 3upd:
1. Domain d3upda1: 3upd A:-5-152 [233801]
  Other proteins in same PDB: d3upda3
  automated match to d4jfrb1
2. Domain d3upda2: 3upd A:153-334 [233802]
  Other proteins in same PDB: d3upda3
  automated match to d4jfrb2
Domain(s) for 4h31:
1. Domain d4h31a1: 4h31 A:1-152 [222349]
  Other proteins in same PDB: d4h31a3
  automated match to d1duvg1
  complexed with cl, cp, nva, pe5, peg
2. Domain d4h31a2: 4h31 A:153-333 [222350]
  Other proteins in same PDB: d4h31a3
  automated match to d1duvg2
  complexed with cl, cp, nva, pe5, peg
3. Domain d4h31b1: 4h31 B:1-152 [222351]
  Other proteins in same PDB: d4h31a3
  automated match to d1duvg1
  complexed with cl, cp, nva, pe5, peg
4. Domain d4h31b2: 4h31 B:153-333 [222352]
  Other proteins in same PDB: d4h31a3
  automated match to d1duvg2
  complexed with cl, cp, nva, pe5, peg
5. Domain d4h31c1: 4h31 C:1-152 [222353]
  Other proteins in same PDB: d4h31a3
  automated match to d1duvg1
  complexed with cl, cp, nva, pe5, peg
6. Domain d4h31c2: 4h31 C:153-334 [222354]
  Other proteins in same PDB: d4h31a3
  automated match to d1duvg2
  complexed with cl, cp, nva, pe5, peg
Domain(s) for 4jfr:
1. Domain d4jfra1: 4jfr A:1-152 [223790]
  Other proteins in same PDB: d4jfra3, d4jfrb3
  automated match to d1duvg1
  complexed with cl, cp, mg
2. Domain d4jfra2: 4jfr A:153-334 [223791]
  Other proteins in same PDB: d4jfra3, d4jfrb3
  automated match to d1duvg2
  complexed with cl, cp, mg
3. Domain d4jfrb1: 4jfr B:1-152 [223792]
  Other proteins in same PDB: d4jfra3, d4jfrb3
  automated match to d1duvg1
  complexed with cl, cp, mg
4. Domain d4jfrb2: 4jfr B:153-334 [223793]
  Other proteins in same PDB: d4jfra3, d4jfrb3
  automated match to d1duvg2
  complexed with cl, cp, mg
5. Domain d4jfrc1: 4jfr C:1-152 [223794]
  Other proteins in same PDB: d4jfra3, d4jfrb3
  automated match to d1duvg1
  complexed with cl, cp, mg
6. Domain d4jfrc2: 4jfr C:153-334 [223795]
  Other proteins in same PDB: d4jfra3, d4jfrb3
  automated match to d1duvg2
  complexed with cl, cp, mg
Domain(s) for 4jhx:
1. Domain d4jhxa1: 4jhx A:1-152 [223827]
  Other proteins in same PDB: d4jhxa3
  automated match to d1duvg1
  complexed with arg, cl, cp, peg
2. Domain d4jhxa2: 4jhx A:153-334 [223828]
  Other proteins in same PDB: d4jhxa3
  automated match to d1duvg2
  complexed with arg, cl, cp, peg
3. Domain d4jhxb1: 4jhx B:3-152 [223829]
  Other proteins in same PDB: d4jhxa3
  automated match to d1duvg1
  complexed with arg, cl, cp, peg
4. Domain d4jhxb2: 4jhx B:153-334 [223830]
  Other proteins in same PDB: d4jhxa3
  automated match to d1duvg2
  complexed with arg, cl, cp, peg
5. Domain d4jhxc1: 4jhx C:3-152 [223831]
  Other proteins in same PDB: d4jhxa3
  automated match to d1duvg1
  complexed with arg, cl, cp, peg
6. Domain d4jhxc2: 4jhx C:153-334 [223832]
  Other proteins in same PDB: d4jhxa3
  automated match to d1duvg2
  complexed with arg, cl, cp, peg
Domain(s) for 4jqo:
1. Domain d4jqoa1: 4jqo A:1-152 [223942]
  Other proteins in same PDB: d4jqoa3, d4jqob3
  automated match to d1duvg1
  complexed with cir, cl, peg, po4
2. Domain d4jqoa2: 4jqo A:153-334 [223943]
  Other proteins in same PDB: d4jqoa3, d4jqob3
  automated match to d1duvg2
  complexed with cir, cl, peg, po4
3. Domain d4jqob1: 4jqo B:1-152 [223944]
  Other proteins in same PDB: d4jqoa3, d4jqob3
  automated match to d1duvg1
  complexed with cir, cl, peg, po4
4. Domain d4jqob2: 4jqo B:153-334 [223945]
  Other proteins in same PDB: d4jqoa3, d4jqob3
  automated match to d1duvg2
  complexed with cir, cl, peg, po4
5. Domain d4jqoc1: 4jqo C:1-152 [223946]
  Other proteins in same PDB: d4jqoa3, d4jqob3
  automated match to d1duvg1
  complexed with cir, cl, peg, po4
6. Domain d4jqoc2: 4jqo C:153-334 [223947]
  Other proteins in same PDB: d4jqoa3, d4jqob3
  automated match to d1duvg2
  complexed with cir, cl, peg, po4
Domain(s) for 4kwt:
1. Domain d4kwta1: 4kwt A:1-152 [224513]
  Other proteins in same PDB: d4kwta3, d4kwtb3
  automated match to d1duvg1
  complexed with cl, peg
2. Domain d4kwta2: 4kwt A:153-334 [224514]
  Other proteins in same PDB: d4kwta3, d4kwtb3
  automated match to d1duvg2
  complexed with cl, peg
3. Domain d4kwtb1: 4kwt B:1-152 [224515]
  Other proteins in same PDB: d4kwta3, d4kwtb3
  automated match to d1duvg1
  complexed with cl, peg
4. Domain d4kwtb2: 4kwt B:153-334 [224516]
  Other proteins in same PDB: d4kwta3, d4kwtb3
  automated match to d1duvg2
  complexed with cl, peg
5. Domain d4kwtc1: 4kwt C:1-152 [224517]
  Other proteins in same PDB: d4kwta3, d4kwtb3
  automated match to d1duvg1
  complexed with cl, peg
6. Domain d4kwtc2: 4kwt C:153-334 [224518]
  Other proteins in same PDB: d4kwta3, d4kwtb3
  automated match to d1duvg2
  complexed with cl, peg

More info for Species Vibrio vulnificus [TaxId:216895] from c.78.1.0 automated matches

Timeline for Species Vibrio vulnificus [TaxId:216895] from c.78.1.0 automated matches:

Species Vibrio vulnificus [TaxId:216895] from c.78.1.0 automated matches first appeared in SCOPe 2.03
Species Vibrio vulnificus [TaxId:216895] from c.78.1.0 automated matches appears in SCOPe 2.07