Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.15: Xylose isomerase-like [51658] (8 families) different families share similar but non-identical metal-binding sites |
Family c.1.15.0: automated matches [191634] (1 protein) not a true family |
Protein automated matches [191168] (5 species) not a true protein |
Bacteroides thetaiotaomicron [TaxId:226186] [311472] (1 PDB entry) |
Domain d4xkma_: 4xkm A: [310041] automated match to d1a0ea_ complexed with mn |
Domain d4xkmb_: 4xkm B: [310042] automated match to d1a0ea_ complexed with mn |
Domain d4xkmc_: 4xkm C: [310043] automated match to d1a0ea_ complexed with mn |
Domain d4xkmd_: 4xkm D: [310044] automated match to d1a0ea_ complexed with mn |
Domain d4xkme_: 4xkm E: [310045] automated match to d1a0ea_ complexed with mn |
Domain d4xkmf_: 4xkm F: [310046] automated match to d1a0ea_ complexed with mn |
Domain d4xkmg_: 4xkm G: [310047] automated match to d1a0ea_ complexed with mn |
Domain d4xkmh_: 4xkm H: [310048] automated match to d1a0ea_ complexed with mn |
Brucella melitensis [TaxId:359391] [189392] (1 PDB entry) |
Domain d3ngfa_: 3ngf A: [182260] Other proteins in same PDB: d3ngfb2 automated match to d1k77a_ complexed with gol, mn |
Domain d3ngfb1: 3ngf B:1-258 [182261] Other proteins in same PDB: d3ngfb2 automated match to d1k77a_ complexed with gol, mn |
Piromyces sp. [TaxId:73868] [340898] (15 PDB entries) |
Domain d5nh4a_: 5nh4 A: [340927] automated match to d4xkmf_ complexed with gol, mg, so4 |
Domain d5nh4b_: 5nh4 B: [340930] automated match to d4xkmf_ complexed with gol, mg, so4 |
Domain d5nh4c_: 5nh4 C: [340928] automated match to d4xkmf_ complexed with gol, mg, so4 |
Domain d5nh4d_: 5nh4 D: [340969] automated match to d4xkmf_ complexed with gol, mg, so4 |
Domain d5nh5a_: 5nh5 A: [340929] automated match to d4xkmf_ complexed with ca, fe2, gol, mg, so4 |
Domain d5nh5b_: 5nh5 B: [340931] automated match to d4xkmf_ complexed with ca, fe2, gol, mg, so4 |
Domain d5nh5c_: 5nh5 C: [340932] automated match to d4xkmf_ complexed with ca, fe2, gol, mg, so4 |
Domain d5nh5d_: 5nh5 D: [340946] automated match to d4xkmf_ complexed with ca, fe2, gol, mg, so4 |
Domain d5nh6a_: 5nh6 A: [340950] automated match to d4xkmf_ complexed with mg, so4, xyl |
Domain d5nh6b_: 5nh6 B: [340916] automated match to d4xkmf_ complexed with mg, so4, xyl |
Domain d5nh6c_: 5nh6 C: [340956] automated match to d4xkmf_ complexed with mg, so4, xyl |
Domain d5nh6d_: 5nh6 D: [340914] automated match to d4xkmf_ complexed with mg, so4, xyl |
Domain d5nh7a_: 5nh7 A: [341039] automated match to d4xkmf_ complexed with mg, so4, xls, xyp, xys |
Domain d5nh7b_: 5nh7 B: [340965] automated match to d4xkmf_ complexed with mg, so4, xls, xyp, xys |
Domain d5nh7c_: 5nh7 C: [341057] automated match to d4xkmf_ complexed with mg, so4, xls, xyp, xys |
Domain d5nh7d_: 5nh7 D: [340933] automated match to d4xkmf_ complexed with mg, so4, xls, xyp, xys |
Domain d5nh8a_: 5nh8 A: [340952] automated match to d4xkmf_ complexed with ca, so4, xls, xyp |
Domain d5nh8b_: 5nh8 B: [340926] automated match to d4xkmf_ complexed with ca, so4, xls, xyp |
Domain d5nh8c_: 5nh8 C: [340959] automated match to d4xkmf_ complexed with ca, so4, xls, xyp |
Domain d5nh8d_: 5nh8 D: [340913] automated match to d4xkmf_ complexed with ca, so4, xls, xyp |
Domain d5nh9a_: 5nh9 A: [340937] automated match to d4xkmf_ complexed with mn, so4, xls, xyp |
Domain d5nh9b_: 5nh9 B: [340917] automated match to d4xkmf_ complexed with mn, so4, xls, xyp |
Domain d5nh9c_: 5nh9 C: [340943] automated match to d4xkmf_ complexed with mn, so4, xls, xyp |
Domain d5nh9d_: 5nh9 D: [340942] automated match to d4xkmf_ complexed with mn, so4, xls, xyp |
Domain d5nhaa_: 5nha A: [340902] automated match to d4xkmf_ complexed with mn, so4, sor |
Domain d5nhab_: 5nha B: [340947] automated match to d4xkmf_ complexed with mn, so4, sor |
Domain d5nhac_: 5nha C: [340909] automated match to d4xkmf_ complexed with mn, so4, sor |
Domain d5nhad_: 5nha D: [340919] automated match to d4xkmf_ complexed with mn, so4, sor |
Domain d5nhba_: 5nhb A: [340899] automated match to d4xkmf_ complexed with fe2, so4 |
Domain d5nhbb_: 5nhb B: [340903] automated match to d4xkmf_ complexed with fe2, so4 |
Domain d5nhbc_: 5nhb C: [340921] automated match to d4xkmf_ complexed with fe2, so4 |
Domain d5nhbd_: 5nhb D: [340918] automated match to d4xkmf_ complexed with fe2, so4 |
Domain d5nhca_: 5nhc A: [340958] automated match to d4xkmf_ complexed with co, hyp, xul |
Domain d5nhcb_: 5nhc B: [340963] automated match to d4xkmf_ complexed with co, hyp, xul |
Domain d5nhcc_: 5nhc C: [341103] automated match to d4xkmf_ complexed with co, hyp, xul |
Domain d5nhcd_: 5nhc D: [340941] automated match to d4xkmf_ complexed with co, hyp, xul |
Domain d5nhda_: 5nhd A: [340907] automated match to d4xkmf_ complexed with ni, so4, xls, xyp, xys |
Domain d5nhdb_: 5nhd B: [340904] automated match to d4xkmf_ complexed with ni, so4, xls, xyp, xys |
Domain d5nhdc_: 5nhd C: [340999] automated match to d4xkmf_ complexed with ni, so4, xls, xyp, xys |
Domain d5nhdd_: 5nhd D: [340974] automated match to d4xkmf_ complexed with ni, so4, xls, xyp, xys |
Domain d5nhea_: 5nhe A: [340966] automated match to d4xkmf_ complexed with cd, so4, xls, xyp, xys |
Domain d5nheb_: 5nhe B: [340915] automated match to d4xkmf_ complexed with cd, so4, xls, xyp, xys |
Domain d5nhec_: 5nhe C: [340951] automated match to d4xkmf_ complexed with cd, so4, xls, xyp, xys |
Domain d5nhed_: 5nhe D: [341003] automated match to d4xkmf_ complexed with cd, so4, xls, xyp, xys |
Domain d5nhma_: 5nhm A: [340968] automated match to d4xkmf_ complexed with acy, gol, so4 |
Domain d5nhmb_: 5nhm B: [340940] automated match to d4xkmf_ complexed with acy, gol, so4 |
Domain d5nhmc_: 5nhm C: [341014] automated match to d4xkmf_ complexed with acy, gol, so4 |
Domain d5nhmd_: 5nhm D: [341037] automated match to d4xkmf_ complexed with acy, gol, so4 |
Domain d5yn3a_: 5yn3 A: [352005] automated match to d5nhma_ complexed with gol, mn |
Domain d5yn3b_: 5yn3 B: [351973] automated match to d5nhma_ complexed with gol, mn |
Domain d5yn3c_: 5yn3 C: [351971] automated match to d5nhma_ complexed with gol, mn |
Domain d5yn3d_: 5yn3 D: [352013] automated match to d5nhma_ complexed with gol, mn |
Domain d6t8ea_: 6t8e A: [379659] automated match to d5nhma_ complexed with ca, so4, xls, xyp, xys |
Domain d6t8eb_: 6t8e B: [379654] automated match to d5nhma_ complexed with ca, so4, xls, xyp, xys |
Domain d6t8ec_: 6t8e C: [379656] automated match to d5nhma_ complexed with ca, so4, xls, xyp, xys |
Domain d6t8ed_: 6t8e D: [379651] automated match to d5nhma_ complexed with ca, so4, xls, xyp, xys |
Domain d6t8fa_: 6t8f A: [379662] automated match to d5nhma_ complexed with ca, so4, xls, xyp, xys; mutant |
Domain d6t8fb_: 6t8f B: [379663] automated match to d5nhma_ complexed with ca, so4, xls, xyp, xys; mutant |
Domain d6t8fc_: 6t8f C: [379665] automated match to d5nhma_ complexed with ca, so4, xls, xyp, xys; mutant |
Domain d6t8fd_: 6t8f D: [379702] automated match to d5nhma_ complexed with ca, so4, xls, xyp, xys; mutant |
Thermotoga maritima [TaxId:243274] [255680] (3 PDB entries) |
Domain d2x7va_: 2x7v A: [244451] automated match to d3aama_ complexed with zn |
Domain d2x7wa_: 2x7w A: [244452] automated match to d3aama_ complexed with bcn, cd, zn |
Domain d4hnoa1: 4hno A:2-285 [252475] Other proteins in same PDB: d4hnoa2 automated match to d3aama_ complexed with edo, mg, mn, so4, trs, zn |
Thermus thermophilus HB8 [TaxId:300852] [226025] (1 PDB entry) |
Domain d3aama_: 3aam A: [208187] automated match to d1quma_ complexed with mn, po4 |
Timeline for Protein automated matches from c.1.15.0: automated matches: