Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2304501Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 2305606Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (86 families) (S)
    contains a small beta-sheet (wing)
  5. 2306002Family a.4.5.19: Z-DNA binding domain [46853] (5 protein domains)
    Pfam PF02295
  6. 2306035Protein automated matches [190680] (2 species)
    not a true protein

Species:

  1. 2306036Human (Homo sapiens) [TaxId:9606] [225893] (3 PDB entries)
    1. Domain for 2l54:
    2. Domains for 3irq:
      1. 2306041Domain d3irqa1: 3irq A:140-197 [211851]
        Other proteins in same PDB: d3irqa2, d3irqb2, d3irqc2, d3irqd2
        automated match to d1qbjc_
        protein/DNA complex; protein/RNA complex
      2. 2306042Domain d3irqb1: 3irq B:140-198 [211852]
        Other proteins in same PDB: d3irqa2, d3irqb2, d3irqc2, d3irqd2
        automated match to d1qbjc_
        protein/DNA complex; protein/RNA complex
      3. 2306043Domain d3irqc1: 3irq C:140-199 [211853]
        Other proteins in same PDB: d3irqa2, d3irqb2, d3irqc2, d3irqd2
        automated match to d1qbjc_
        protein/DNA complex; protein/RNA complex
      4. 2306044Domain d3irqd1: 3irq D:140-199 [211854]
        Other proteins in same PDB: d3irqa2, d3irqb2, d3irqc2, d3irqd2
        automated match to d1qbjc_
        protein/DNA complex; protein/RNA complex
    3. Domains for 3irr:
      1. 2306037Domain d3irra1: 3irr A:140-198 [211855]
        Other proteins in same PDB: d3irra2, d3irrb2, d3irrc2, d3irrd2
        automated match to d1qbjc_
        protein/DNA complex; protein/RNA complex; complexed with epe
      2. 2306038Domain d3irrb1: 3irr B:140-198 [211856]
        Other proteins in same PDB: d3irra2, d3irrb2, d3irrc2, d3irrd2
        automated match to d1qbjc_
        protein/DNA complex; protein/RNA complex; complexed with epe
      3. 2306039Domain d3irrc1: 3irr C:140-198 [211857]
        Other proteins in same PDB: d3irra2, d3irrb2, d3irrc2, d3irrd2
        automated match to d1qbjc_
        protein/DNA complex; protein/RNA complex; complexed with epe
      4. 2306040Domain d3irrd1: 3irr D:140-199 [211858]
        Other proteins in same PDB: d3irra2, d3irrb2, d3irrc2, d3irrd2
        automated match to d1qbjc_
        protein/DNA complex; protein/RNA complex; complexed with epe
  2. 2306046Mouse (Mus musculus) [TaxId:10090] [187801] (1 PDB entry)

More info for Protein automated matches from a.4.5.19: Z-DNA binding domain

Timeline for Protein automated matches from a.4.5.19: Z-DNA binding domain: