Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1428504Fold d.113: Nudix [55810] (1 superfamily)
    beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet
    contains beta-grasp motif
  4. 1428505Superfamily d.113.1: Nudix [55811] (8 families) (S)
  5. 1428506Family d.113.1.1: MutT-like [55812] (17 proteins)
  6. 1428644Protein automated matches [190465] (3 species)
    not a true protein

Species:

  1. 1428645African clawed frog (Xenopus laevis) [TaxId:8355] [187382] (6 PDB entries)
    1. Domain for 1u20:
    2. Domains for 2a8p:
      1. 1428655Domain d2a8pa_: 2a8p A: [126410]
        automated match to d1u20a1
        protein/RNA complex; complexed with mn
      2. 1428656Domain d2a8pb_: 2a8p B: [126411]
        automated match to d1u20a1
        protein/RNA complex; complexed with mn
    3. Domains for 2a8q:
      1. 1428651Domain d2a8qa_: 2a8q A: [126412]
        automated match to d1u20a1
        protein/RNA complex; complexed with mn, pop
      2. 1428652Domain d2a8qb_: 2a8q B: [126413]
        automated match to d1u20a1
        protein/RNA complex; complexed with mn, pop
    4. Domains for 2a8r:
      1. 1428653Domain d2a8ra_: 2a8r A: [126414]
        automated match to d1u20a1
        protein/RNA complex; complexed with mn, pop
      2. 1428654Domain d2a8rb_: 2a8r B: [126415]
        automated match to d1u20a1
        protein/RNA complex; complexed with mn, pop
    5. Domains for 2a8s:
      1. 1428649Domain d2a8sa_: 2a8s A: [126416]
        automated match to d1u20a1
        protein/RNA complex; complexed with gtp, mn
      2. 1428650Domain d2a8sb_: 2a8s B: [126417]
        automated match to d1u20a1
        protein/RNA complex; complexed with gtp, mn
    6. Domains for 2a8t:
      1. 1428647Domain d2a8ta_: 2a8t A: [126418]
        automated match to d1u20a1
        protein/RNA complex; complexed with mgt, mn
      2. 1428648Domain d2a8tb_: 2a8t B: [126419]
        automated match to d1u20a1
        protein/RNA complex; complexed with mgt, mn
  2. 1428657Human (Homo sapiens) [TaxId:9606] [189707] (9 PDB entries)
    1. Domains for 3mcf:
      1. 1428666Domain d3mcfa_: 3mcf A: [199827]
        automated match to d3mcfb_
        complexed with flc, gol
      2. 1428667Domain d3mcfb_: 3mcf B: [196459]
        automated match to d2duka_
        complexed with flc, gol
    2. Domains for 3q93:
      1. 1428662Domain d3q93a_: 3q93 A: [215131]
        automated match to d3zr0b_
        complexed with gol, imd, so4
      2. 1428663Domain d3q93b_: 3q93 B: [215132]
        automated match to d3zr0b_
        complexed with gol, imd, so4
    3. Domains for 3u53:
      1. 1428672Domain d3u53a_: 3u53 A: [200932]
        automated match to d3u53c_
        complexed with gol, so4
      2. 1428673Domain d3u53b_: 3u53 B: [200933]
        automated match to d3u53c_
        complexed with gol, so4
      3. 1428674Domain d3u53c_: 3u53 C: [193745]
        automated match to d1xsba_
        complexed with gol, so4
      4. 1428675Domain d3u53d_: 3u53 D: [200934]
        automated match to d3u53c_
        complexed with gol, so4
    4. Domains for 3zr0:
      1. 1428660Domain d3zr0a_: 3zr0 A: [186523]
        automated match to d1irya_
        protein/DNA complex; complexed with 8og, so4
      2. 1428661Domain d3zr0b_: 3zr0 B: [186524]
        automated match to d1irya_
        protein/DNA complex; complexed with 8og, so4
    5. Domains for 3zr1:
      1. 1428664Domain d3zr1a_: 3zr1 A: [186525]
        automated match to d1irya_
        complexed with act, so4
      2. 1428665Domain d3zr1b_: 3zr1 B: [186526]
        automated match to d1irya_
        complexed with act, so4
    6. Domain for 4c9w:
    7. Domain for 4c9x:
    8. Domains for 4ick:
      1. 1428670Domain d4icka_: 4ick A: [229603]
        automated match to d4ijxa_
        complexed with gol, mg, po4; mutant
      2. 1428671Domain d4ickb_: 4ick B: [229602]
        automated match to d4ijxb_
        complexed with gol, mg, po4; mutant
    9. Domains for 4ijx:
      1. 1428668Domain d4ijxa_: 4ijx A: [196683]
        automated match to d1xsba_
        complexed with dpo, gol, mg, po4; mutant
      2. 1428669Domain d4ijxb_: 4ijx B: [196682]
        automated match to d1xsba_
        complexed with dpo, gol, mg, po4; mutant
  3. 1428676Mouse (Mus musculus) [TaxId:10090] [187640] (1 PDB entry)

More info for Protein automated matches from d.113.1.1: MutT-like

Timeline for Protein automated matches from d.113.1.1: MutT-like: