Lineage for Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 723373Fold d.58: Ferredoxin-like [54861] (55 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 725281Superfamily d.58.18: ACT-like [55021] (12 families) (S)
    regulatory domain linked to a wide range of metabolic enzymes
  5. 725317Family d.58.18.4: Nickel responsive regulator NikR, C-terminal domain [102999] (1 protein)
  6. 725318Protein Nickel responsive regulator NikR, C-terminal domain [103000] (2 species)
  7. 725319Species Archaeon Pyrococcus horikoshii [TaxId:53953] [143375] (5 PDB entries)

PDB entries in Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 2bj1:
    1. 725330Domain d2bj1a2: 2bj1 A:51-132 [128597]
      Other proteins in same PDB: d2bj1a1, d2bj1b1
      complexed with cl, ni
    2. 725331Domain d2bj1b2: 2bj1 B:51-132 [128599]
      Other proteins in same PDB: d2bj1a1, d2bj1b1
      automatically matched to 2BJ1 A:51-132
      complexed with cl, ni
  2. Domain(s) for 2bj3:
    1. 725324Domain d2bj3a2: 2bj3 A:51-132 [128601]
      Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1
      automatically matched to 2BJ1 A:51-132
      complexed with cl, mg
    2. 725325Domain d2bj3b2: 2bj3 B:51-132 [128603]
      Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1
      automatically matched to 2BJ1 A:51-132
      complexed with cl, mg
    3. 725326Domain d2bj3c2: 2bj3 C:51-132 [128605]
      Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1
      automatically matched to 2BJ1 A:51-132
      complexed with cl, mg
    4. 725327Domain d2bj3d2: 2bj3 D:51-132 [128607]
      Other proteins in same PDB: d2bj3a1, d2bj3b1, d2bj3c1, d2bj3d1
      automatically matched to 2BJ1 A:51-132
      complexed with cl, mg
  3. Domain(s) for 2bj7:
    1. 725320Domain d2bj7a2: 2bj7 A:51-132 [128609]
      Other proteins in same PDB: d2bj7a1, d2bj7b1
      automatically matched to 2BJ1 A:51-132
      complexed with cl, edo, ni, pg4
    2. 725321Domain d2bj7b2: 2bj7 B:51-132 [128611]
      Other proteins in same PDB: d2bj7a1, d2bj7b1
      automatically matched to 2BJ1 A:51-132
      complexed with cl, edo, ni, pg4
  4. Domain(s) for 2bj8:
    1. 725322Domain d2bj8a2: 2bj8 A:51-132 [128613]
      Other proteins in same PDB: d2bj8a1, d2bj8b1
      automatically matched to 2BJ1 A:51-132
      complexed with cl, edo, epe, ni, pg4
    2. 725323Domain d2bj8b2: 2bj8 B:51-132 [128615]
      Other proteins in same PDB: d2bj8a1, d2bj8b1
      automatically matched to 2BJ1 A:51-132
      complexed with cl, edo, epe, ni, pg4
  5. Domain(s) for 2bj9:
    1. 725328Domain d2bj9a2: 2bj9 A:51-132 [128617]
      Other proteins in same PDB: d2bj9a1, d2bj9b1
      automatically matched to 2BJ1 A:51-132
      complexed with ni, pg4, po4
    2. 725329Domain d2bj9b2: 2bj9 B:51-132 [128619]
      Other proteins in same PDB: d2bj9a1, d2bj9b1
      automatically matched to 2BJ1 A:51-132
      complexed with ni, pg4, po4

More info for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.58.18.4 Nickel responsive regulator NikR, C-terminal domain

Timeline for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.58.18.4 Nickel responsive regulator NikR, C-terminal domain:

  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.58.18.4 Nickel responsive regulator NikR, C-terminal domain is new in SCOP 1.73
  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.58.18.4 Nickel responsive regulator NikR, C-terminal domain appears in SCOP 1.75
  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.58.18.4 Nickel responsive regulator NikR, C-terminal domain appears in the current release, SCOPe 2.08, called Species Pyrococcus horikoshii [TaxId:53953] from d.58.18.4 Nickel responsive regulator NikR, C-terminal domain