![]() | Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds) |
![]() | Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
![]() | Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families) ![]() "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
![]() | Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins) |
![]() | Protein Viral RNA polymerase [56695] (14 species) |
![]() | Avian infectious bursal disease virus [TaxId:10995] [160955] (1 PDB entry) Uniprot Q9Q6Q5 31-804 |
![]() | Domain d2pgga1: 2pgg A:31-804 [149462] |
![]() | Bovine viral diarrhea virus [TaxId:11099] [103401] (3 PDB entries) |
![]() | Domain d1s48a_: 1s48 A: [98475] |
![]() | Domain d1s49a_: 1s49 A: [98476] protein/RNA complex; complexed with gtp |
![]() | Domain d1s4fa_: 1s4f A: [98495] |
![]() | Domain d1s4fb_: 1s4f B: [98496] |
![]() | Domain d1s4fc_: 1s4f C: [98497] |
![]() | Domain d1s4fd_: 1s4f D: [98498] |
![]() | Foot-and-mouth disease virus - type c [TaxId:12116] [187085] (1 PDB entry) |
![]() | Domain d2f8ex_: 2f8e X: [133121] automated match to d1u09a_ protein/RNA complex; complexed with mg, mn, u5p |
![]() | Foot-and-mouth disease virus [TaxId:12110] [111302] (14 PDB entries) Uniprot Q9QCE4 1858-2327 |
![]() | Domain d1u09a_: 1u09 A: [107545] protein/DNA complex; protein/RNA complex |
![]() | Domain d1wnea_: 1wne A: [109434] protein/DNA complex; protein/RNA complex; complexed with mg |
![]() | Domain d2d7sa1: 2d7s A:1-474 [131326] automatically matched to d1u09a_ protein/RNA complex |
![]() | Domain d2e9rx_: 2e9r X: [146732] automated match to d1u09a_ protein/RNA complex; complexed with mg, rtp |
![]() | Domain d2e9ta_: 2e9t A: [146733] automated match to d1u09a_ protein/RNA complex; complexed with mg, ppv |
![]() | Domain d2e9td_: 2e9t D: [146734] automated match to d1u09a_ protein/RNA complex; complexed with mg, ppv |
![]() | Domain d2e9za1: 2e9z A:1-476 [146753] automatically matched to d1u09a_ protein/RNA complex; complexed with mg, ppv, utp |
![]() | Domain d2ec0a_: 2ec0 A: [146776] automated match to d1u09a_ protein/RNA complex; complexed with mg, ppv |
![]() | Domain d2ec0d_: 2ec0 D: [146777] automated match to d1u09a_ protein/RNA complex; complexed with mg, ppv |
![]() | Domain d3klva_: 3klv A: [179431] automated match to d1u09a_ protein/RNA complex; complexed with mg; mutant |
![]() | Domain d3kmqa_: 3kmq A: [179454] automated match to d1u09a_ protein/RNA complex; mutant |
![]() | Domain d3kmsa_: 3kms A: [179455] automated match to d1u09a_ protein/RNA complex; complexed with mg; mutant |
![]() | Domain d3knaa_: 3kna A: [179469] automated match to d1u09a_ protein/RNA complex; complexed with mg; mutant |
![]() | Domain d3koaa_: 3koa A: [179502] automated match to d1u09a_ protein/RNA complex; complexed with dpo, mg; mutant |
![]() | Domain d3nkya_: 3nky A: [182353] automated match to d1u09a_ complexed with mg; mutant |
![]() | Domain d3nmaa_: 3nma A: [182396] automated match to d1u09a_ protein/RNA complex; complexed with mg; mutant |
![]() | Hepatitis c virus isolate [TaxId:420174] [188905] (3 PDB entries) |
![]() | Domain d3gnva_: 3gnv A: [176783] automated match to d1nb4a_ protein/RNA complex; complexed with gol, xnz |
![]() | Domain d3gnvb_: 3gnv B: [176784] automated match to d1nb4a_ protein/RNA complex; complexed with gol, xnz |
![]() | Domain d3gnwa_: 3gnw A: [176785] automated match to d1nb4a_ protein/RNA complex; complexed with cl, xnc |
![]() | Domain d3gnwb_: 3gnw B: [176786] automated match to d1nb4a_ protein/RNA complex; complexed with cl, xnc |
![]() | Domain d3gola_: 3gol A: [176789] automated match to d1nb4a_ complexed with mg, xnd |
![]() | Domain d3golb_: 3gol B: [176790] automated match to d1nb4a_ complexed with mg, xnd |
![]() | Hepatitis c virus subtype 1a [TaxId:31646] [189928] (2 PDB entries) |
![]() | Domain d3qgha_: 3qgh A: [184375] automated match to d1nb4a_ protein/RNA complex; complexed with 63f, po4 |
![]() | Domain d3qgia_: 3qgi A: [184376] automated match to d1nb4a_ protein/RNA complex; complexed with 33f, gol |
![]() | Hepatitis C virus [TaxId:11103] [56697] (41 PDB entries) |
![]() | Domain d1c2pa_: 1c2p A: [43117] |
![]() | Domain d1c2pb_: 1c2p B: [43118] |
![]() | Domain d1csja_: 1csj A: [43120] |
![]() | Domain d1csjb_: 1csj B: [43121] |
![]() | Domain d1gx5a_: 1gx5 A: [70682] protein/RNA complex; complexed with gtp, mn |
![]() | Domain d1gx6a_: 1gx6 A: [70683] protein/RNA complex; complexed with mn, utp |
![]() | Domain d1nb4a_: 1nb4 A: [85509] |
![]() | Domain d1nb4b_: 1nb4 B: [85510] |
![]() | Domain d1nb6a_: 1nb6 A: [85511] protein/RNA complex; complexed with mn, utp |
![]() | Domain d1nb6b_: 1nb6 B: [85512] protein/RNA complex; complexed with mn, utp |
![]() | Domain d1nb7a_: 1nb7 A: [85513] protein/RNA complex; complexed with mn |
![]() | Domain d1nb7b_: 1nb7 B: [85514] protein/RNA complex; complexed with mn |
![]() | Domain d1nhua_: 1nhu A: [85723] protein/RNA complex; complexed with 153 |
![]() | Domain d1nhub_: 1nhu B: [85724] protein/RNA complex; complexed with 153 |
![]() | Domain d1nhva_: 1nhv A: [85725] protein/RNA complex; complexed with 154 |
![]() | Domain d1nhvb_: 1nhv B: [85726] protein/RNA complex; complexed with 154 |
![]() | Domain d1os5a_: 1os5 A: [93475] protein/RNA complex; complexed with nh1 |
![]() | Domain d1quva_: 1quv A: [43119] |
![]() | Domain d2brka1: 2brk A:1-531 [129001] automatically matched to d1csja_ protein/RNA complex; complexed with cmf, mn |
![]() | Domain d2fvca_: 2fvc A: [164476] automated match to d1nb4a_ complexed with 888 |
![]() | Domain d2fvcb_: 2fvc B: [164477] automated match to d1nb4a_ complexed with 888 |
![]() | Domain d2giqa_: 2giq A: [164724] automated match to d1nb4a_ complexed with nn2 |
![]() | Domain d2giqb_: 2giq B: [164725] automated match to d1nb4a_ complexed with nn2 |
![]() | Domain d2gira_: 2gir A: [164726] automated match to d1nb4a_ complexed with nn3 |
![]() | Domain d2girb_: 2gir B: [164727] automated match to d1nb4a_ complexed with nn3 |
![]() | Domain d2haia_: 2hai A: [165036] automated match to d1nb4a_ protein/RNA complex; complexed with pfi |
![]() | Domain d2qe2a_: 2qe2 A: [167555] automated match to d1nb4a_ complexed with 452 |
![]() | Domain d2qe2b_: 2qe2 B: [167556] automated match to d1nb4a_ complexed with 452 |
![]() | Domain d2qe5a_: 2qe5 A: [167559] automated match to d1nb4a_ complexed with 617 |
![]() | Domain d2qe5b_: 2qe5 B: [167560] automated match to d1nb4a_ complexed with 617 |
![]() | Domain d2qe5c_: 2qe5 C: [167561] automated match to d1nb4a_ complexed with 617 |
![]() | Domain d2qe5d_: 2qe5 D: [167562] automated match to d1nb4a_ complexed with 617 |
![]() | Domain d2zkua_: 2zku A: [171292] automated match to d1nb4a_ complexed with acy, gol |
![]() | Domain d2zkub_: 2zku B: [171293] automated match to d1nb4a_ complexed with acy, gol |
![]() | Domain d2zkuc_: 2zku C: [171294] automated match to d1nb4a_ complexed with acy, gol |
![]() | Domain d2zkud_: 2zku D: [171295] automated match to d1nb4a_ complexed with acy, gol |
![]() | Domain d3ciza_: 3ciz A: [173264] automated match to d1nb4a_ protein/RNA complex; complexed with sx1, zn |
![]() | Domain d3cizb_: 3ciz B: [173265] automated match to d1nb4a_ protein/RNA complex; complexed with sx1, zn |
![]() | Domain d3cj0a_: 3cj0 A: [173266] automated match to d1nb4a_ protein/RNA complex; complexed with sx2 |
![]() | Domain d3cj0b_: 3cj0 B: [173267] automated match to d1nb4a_ protein/RNA complex; complexed with sx2 |
![]() | Domain d3cj2a_: 3cj2 A: [173268] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx3 |
![]() | Domain d3cj2b_: 3cj2 B: [173269] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx3 |
![]() | Domain d3cj3a_: 3cj3 A: [173270] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx4 |
![]() | Domain d3cj3b_: 3cj3 B: [173271] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx4 |
![]() | Domain d3cj4a_: 3cj4 A: [173272] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx5 |
![]() | Domain d3cj4b_: 3cj4 B: [173273] automated match to d1nb4a_ protein/RNA complex; complexed with ni, sx5 |
![]() | Domain d3cj5a_: 3cj5 A: [173274] automated match to d1nb4a_ protein/RNA complex; complexed with sx6 |
![]() | Domain d3cj5b_: 3cj5 B: [173275] automated match to d1nb4a_ protein/RNA complex; complexed with sx6 |
![]() | Domain d3frza_: 3frz A: [176007] automated match to d1nb4a_ protein/RNA complex; complexed with ag0, ag6, bme |
![]() | Domain d3h59a_: 3h59 A: [177195] automated match to d1nb4a_ complexed with h59 |
![]() | Domain d3h59b_: 3h59 B: [177196] automated match to d1nb4a_ complexed with h59 |
![]() | Domain d3h5sa_: 3h5s A: [177201] automated match to d1nb4a_ complexed with h5s |
![]() | Domain d3h5sb_: 3h5s B: [177202] automated match to d1nb4a_ complexed with h5s |
![]() | Domain d3h5ua_: 3h5u A: [177203] automated match to d1nb4a_ complexed with h5u |
![]() | Domain d3h5ub_: 3h5u B: [177204] automated match to d1nb4a_ complexed with h5u |
![]() | Domain d3hkya_: 3hky A: [177660] automated match to d1nb4a_ complexed with cl, ix6, so4 |
![]() | Domain d3hkyb_: 3hky B: [177661] automated match to d1nb4a_ complexed with cl, ix6, so4 |
![]() | Domain d3lkha_: 3lkh A: [180342] automated match to d1nb4a_ complexed with lt6 |
![]() | Domain d3lkhb_: 3lkh B: [180343] automated match to d1nb4a_ complexed with lt6 |
![]() | Domain d3mf5a_: 3mf5 A: [181043] automated match to d1c2pb_ complexed with gol, hjz |
![]() | Domain d3mf5b_: 3mf5 B: [181044] automated match to d1c2pb_ complexed with gol, hjz |
![]() | Domain d3mwva_: 3mwv A: [181653] automated match to d1nb4a_ |
![]() | Domain d3mwvb_: 3mwv B: [181654] automated match to d1nb4a_ |
![]() | Domain d3mwwa_: 3mww A: [181655] automated match to d1nb4a_ complexed with biw, so4 |
![]() | Domain d3mwwb_: 3mww B: [181656] automated match to d1nb4a_ complexed with biw, so4 |
![]() | Domain d3q0za_: 3q0z A: [184133] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, so4 |
![]() | Domain d3q0zb_: 3q0z B: [184134] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, so4 |
![]() | Domain d3qgda_: 3qgd A: [184371] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 26s, so4 |
![]() | Domain d3qgdb_: 3qgd B: [184372] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 26s, so4 |
![]() | Domain d3qgfa_: 3qgf A: [184373] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 46f, so4 |
![]() | Domain d3qgfb_: 3qgf B: [184374] automated match to d1nb4a_ protein/RNA complex; complexed with 23e, 46f, so4 |
![]() | Domain d3tyqa_: 3tyq A: [186013] automated match to d1nb4a_ protein/RNA complex; complexed with hi4, po4 |
![]() | Domain d3tyqb_: 3tyq B: [186014] automated match to d1nb4a_ protein/RNA complex; complexed with hi4, po4 |
![]() | Domain d3tyva_: 3tyv A: [186015] automated match to d1nb4a_ protein/RNA complex; complexed with hi3, po4 |
![]() | Domain d3tyvb_: 3tyv B: [186016] automated match to d1nb4a_ protein/RNA complex; complexed with hi3, po4 |
![]() | Domain d3u4oa_: 3u4o A: [186076] automated match to d1nb4a_ complexed with 08e, po4 |
![]() | Domain d3u4ob_: 3u4o B: [186077] automated match to d1nb4a_ complexed with 08e, po4 |
![]() | Domain d3u4ra_: 3u4r A: [186078] automated match to d1nb4a_ complexed with 08f |
![]() | Domain d3u4rb_: 3u4r B: [186079] automated match to d1nb4a_ complexed with 08f |
![]() | Human rhinovirus 14, HRV-14 [TaxId:12131] [111301] (1 PDB entry) Uniprot P03303 1720-2179 |
![]() | Domain d1xr5a_: 1xr5 A: [115864] complexed with sm |
![]() | Human rhinovirus 16 [TaxId:31708] [188024] (1 PDB entry) |
![]() | Domain d1tp7a_: 1tp7 A: [161779] automated match to d1xr6a_ complexed with dmx, so4 |
![]() | Domain d1tp7b_: 1tp7 B: [161780] automated match to d1xr6a_ complexed with dmx, so4 |
![]() | Domain d1tp7c_: 1tp7 C: [161781] automated match to d1xr6a_ complexed with dmx, so4 |
![]() | Domain d1tp7d_: 1tp7 D: [161782] automated match to d1xr6a_ complexed with dmx, so4 |
![]() | Human rhinovirus 16, HRV-16 [TaxId:31708] [111300] (1 PDB entry) Uniprot Q82122 1694-2153 |
![]() | Domain d1xr7a_: 1xr7 A: [115866] |
![]() | Domain d1xr7b_: 1xr7 B: [115867] |
![]() | Human rhinovirus 1B, HRV-1B [TaxId:12129] [111299] (1 PDB entry) Uniprot P12916 1698-2157 |
![]() | Domain d1xr6a_: 1xr6 A: [115865] complexed with k |
![]() | Norwalk virus [TaxId:11983] [103400] (7 PDB entries) |
![]() | Domain d1sh0a_: 1sh0 A: [98876] |
![]() | Domain d1sh0b_: 1sh0 B: [98877] |
![]() | Domain d1sh2a_: 1sh2 A: [98878] |
![]() | Domain d1sh3a_: 1sh3 A: [98879] complexed with mg |
![]() | Domain d1sh3b_: 1sh3 B: [98880] complexed with mg |
![]() | Domain d3bsna_: 3bsn A: [172811] automated match to d1sh0b_ protein/RNA complex; complexed with gol, mn, n5c |
![]() | Domain d3bsoa_: 3bso A: [172812] automated match to d1sh0b_ protein/RNA complex; complexed with ctp, gol, mn |
![]() | Domain d3h5xa_: 3h5x A: [177205] automated match to d1sh0b_ protein/RNA complex; complexed with csg, gol, mn |
![]() | Domain d3h5ya_: 3h5y A: [177206] automated match to d1sh0b_ protein/RNA complex; complexed with ctp, gol, mn |
![]() | Poliovirus type 1, strain Mahoney [TaxId:12080] [56696] (18 PDB entries) Uniprot P03300 1748-2208 |
![]() | Domain d1ra6a_: 1ra6 A: [104879] complexed with acy |
![]() | Domain d1ra7a_: 1ra7 A: [104880] complexed with acy, gtp |
![]() | Domain d1raja_: 1raj A: [104881] |
![]() | Domain d1rdra_: 1rdr A: [43116] complexed with ca |
![]() | Domain d1tqla_: 1tql A: [107235] complexed with acy; mutant |
![]() | Domain d2ijd12: 2ijd 1:184-644 [137475] Other proteins in same PDB: d2ijd11, d2ijd21 automatically matched to d1ra6a_ complexed with so4, zn |
![]() | Domain d2ijd22: 2ijd 2:184-644 [137477] Other proteins in same PDB: d2ijd11, d2ijd21 automatically matched to d1ra6a_ complexed with so4, zn |
![]() | Domain d2ilya_: 2ily A: [137500] automated match to d1ra6a_ complexed with acy, atp, na |
![]() | Domain d2ilza_: 2ilz A: [137501] automated match to d1ra6a_ complexed with acy, gtp, mn, na |
![]() | Domain d2im0a_: 2im0 A: [137502] automated match to d1ra6a_ complexed with acy, ctp, na |
![]() | Domain d2im1a_: 2im1 A: [137503] automated match to d1ra6a_ complexed with acy, ctp, mn, na |
![]() | Domain d2im2a_: 2im2 A: [137504] automated match to d1ra6a_ complexed with acy, na, utp |
![]() | Domain d2im3a_: 2im3 A: [137505] automated match to d1ra6a_ complexed with acy, mn, na, utp |
![]() | Domain d3ol6a_: 3ol6 A: [183110] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, zn |
![]() | Domain d3ol6e_: 3ol6 E: [183111] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, zn |
![]() | Domain d3ol6i_: 3ol6 I: [183112] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, zn |
![]() | Domain d3ol6m_: 3ol6 M: [183113] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, zn |
![]() | Domain d3ol7a_: 3ol7 A: [183114] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn |
![]() | Domain d3ol7e_: 3ol7 E: [183115] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn |
![]() | Domain d3ol7i_: 3ol7 I: [183116] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn |
![]() | Domain d3ol7m_: 3ol7 M: [183117] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn |
![]() | Domain d3ol8a_: 3ol8 A: [183118] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mn, pop, zn |
![]() | Domain d3ol8e_: 3ol8 E: [183119] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mn, pop, zn |
![]() | Domain d3ol8i_: 3ol8 I: [183120] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mn, pop, zn |
![]() | Domain d3ol8m_: 3ol8 M: [183121] automated match to d1ra6a_ protein/RNA complex; complexed with gol, ipa, mn, pop, zn |
![]() | Domain d3ol9a_: 3ol9 A: [183122] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, pop, zn |
![]() | Domain d3ol9e_: 3ol9 E: [183123] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, pop, zn |
![]() | Domain d3ol9i_: 3ol9 I: [183124] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, pop, zn |
![]() | Domain d3ol9m_: 3ol9 M: [183125] automated match to d1ra6a_ protein/RNA complex; complexed with ipa, pop, zn |
![]() | Domain d3olaa_: 3ola A: [183126] automated match to d1ra6a_ protein/RNA complex; complexed with dcp, gol, ipa, peg, zn |
![]() | Domain d3olae_: 3ola E: [183127] automated match to d1ra6a_ protein/RNA complex; complexed with dcp, gol, ipa, peg, zn |
![]() | Domain d3olai_: 3ola I: [183128] automated match to d1ra6a_ protein/RNA complex; complexed with dcp, gol, ipa, peg, zn |
![]() | Domain d3olam_: 3ola M: [183129] automated match to d1ra6a_ protein/RNA complex; complexed with dcp, gol, ipa, peg, zn |
![]() | Domain d3olba_: 3olb A: [183130] automated match to d1ra6a_ protein/RNA complex; complexed with dct, ipa, zn |
![]() | Domain d3olbe_: 3olb E: [183131] automated match to d1ra6a_ protein/RNA complex; complexed with dct, ipa, zn |
![]() | Domain d3olbi_: 3olb I: [183132] automated match to d1ra6a_ protein/RNA complex; complexed with dct, ipa, zn |
![]() | Domain d3olbm_: 3olb M: [183133] automated match to d1ra6a_ protein/RNA complex; complexed with dct, ipa, zn |
![]() | Rabbit hemorrhagic disease virus [TaxId:11976] [69882] (2 PDB entries) |
![]() | Domain d1khva_: 1khv A: [68627] protein/RNA complex; complexed with lu |
![]() | Domain d1khvb_: 1khv B: [68628] protein/RNA complex; complexed with lu |
![]() | Domain d1khwa_: 1khw A: [68629] protein/RNA complex; complexed with mn |
![]() | Domain d1khwb_: 1khw B: [68630] protein/RNA complex; complexed with mn |
Timeline for Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase: